RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 FRMPD2BQ6IN97 320 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 BRAT1Q6PJG6 821 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 LPPQ93052 612 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 C1GALT1C1Q96EU7 318 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 MGME1Q9BQP7 344 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 MED28Q9H204 178 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 B3GAT2Q9NPZ5 323 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SLC25A14O95258 325 aaPredicted RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 RAF1P04049 648 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 ACPPP15309 386 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 LHCGRP22888 699 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 PCGF2P35227 344 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 FCN2Q15485 313 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TEAD4Q15561 434 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SNAPC1Q16533 368 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TAGAPQ8N103 731 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 NAGSQ8N159 534 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 NANOGP1Q8N7R0 232 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 LKAAEAR1Q8TD35 194 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 CSGALNACT1Q8TDX6 532 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 WACQ9BTA9 647 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 PIGUQ9H490 435 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SLC25A19Q9HC21 320 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 FAM120CQ9NX05 1096 aaKnown RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 FTSJ1Q9UET6 329 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 NCKAP1Q9Y2A7 1128 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TTC3P53804 2025 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 HPGDSO60760 199 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SCN2BO60939 215 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 GADD45GO95257 159 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TBX18O95935 607 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 HLA-DQB1P01920 261 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 FAM157BP0CG42 384 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 AMD1P17707 334 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 CRATP43155 626 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 RPA4Q13156 261 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 FGFBP1Q14512 234 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 NCF4Q15080 339 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 RGNQ15493 299 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 FAM110CQ1W6H9 321 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 KLHL22Q53GT1 634 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 GPR155Q7Z3F1 870 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 PRSS42Q7Z5A4 293 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 CLDN19Q8N6F1 224 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 PROKR2Q8NFJ6 384 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SLC22A8Q8TCC7 542 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 KATNB1Q9BVA0 655 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 RHCGQ9UBD6 479 aa12.85□□□□□ -0.35
DFFB-209ENST00000477548 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
DFFB-209ENST00000477548 PRAMEF33A0A0G2JMD5 474 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 MYADML2A6NDP7 307 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 PCDH7O60245 1069 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 PRAMEF10O60809 474 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 GCM2O75603 506 aaPredicted RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 GASTP01350 101 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 LAMP1P11279 417 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 ICAM2P13598 275 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 ZNF7P17097 686 aaPredicted RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 CACNG1Q06432 222 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 SP140Q13342 867 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 BICRALQ6AI39 1079 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 ARSKQ6UWY0 536 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 CFAP52Q8N1V2 620 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 TOE1Q96GM8 510 aaKnown RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 TMEM43Q9BTV4 400 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 BOCQ9BWV1 1114 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 CLEC4MQ9H2X3 399 aaPredicted RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 PPP1R3EQ9H7J1 279 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 ACAD8Q9UKU7 415 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 YARS2Q9Y2Z4 477 aaKnown RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 COL4A4P53420 1690 aaPredicted RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 YY2O15391 372 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 TPOP07202 933 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 CBX5P45973 191 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 CRTC2Q53ET0 693 aaPredicted RBP12.84□□□□□ -0.35
DFFB-209ENST00000477548 CORO6Q6QEF8 472 aa12.84□□□□□ -0.35
DFFB-209ENST00000477548 ZNF730Q6ZMV8 503 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms