RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 MPP5Q8N3R9 675 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 TC2NQ8N9U0 490 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 PPHLN1Q8NEY8 458 aaKnown RBP14.03□□□□□ -0.16
SMG5-204ENST00000476954 PTPMT1Q8WUK0 201 aaPredicted RBP14.03□□□□□ -0.16
SMG5-204ENST00000476954 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 ANKRD9Q96BM1 317 aaPredicted RBP14.03□□□□□ -0.16
SMG5-204ENST00000476954 ZBED6CLQ96FA7 236 aaPredicted RBP14.03□□□□□ -0.16
SMG5-204ENST00000476954 WDYHV1Q96HA8 205 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 ANP32EQ9BTT0 268 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 UGT2B28Q9BY64 529 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 AMBRA1Q9C0C7 1298 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 ETNK1Q9HBU6 452 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 TREX1Q9NSU2 369 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
SMG5-204ENST00000476954 QPCTLQ9NXS2 382 aa14.03□□□□□ -0.16
SMG5-204ENST00000476954 A0A0G2JN53 185 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 SMTNL1A8MU46 457 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 A8MXE2 369 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 TRAPPC6AO75865 159 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 IFNA16P05015 189 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 SMIM10L1P0DMW3 83 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 NPPBP16860 134 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 COPS2P61201 443 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 CCZ1BP86790 482 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 CCZ1P86791 482 aaPredicted RBP14.02□□□□□ -0.17
SMG5-204ENST00000476954 RGS1Q08116 209 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 NAE1Q13564 534 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 CES3Q6UWW8 571 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 LYPD8Q6UX82 237 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 C22orf34Q6ZV56 151 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 UBE2R2Q712K3 238 aaPredicted RBP14.02□□□□□ -0.17
SMG5-204ENST00000476954 ZNF550Q7Z398 422 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 PIWIL4Q7Z3Z4 852 aaKnown RBP14.02□□□□□ -0.17
SMG5-204ENST00000476954 GCNT2Q8N0V5 402 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 TMEM132CQ8N3T6 1108 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 PAQR8Q8TEZ7 354 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 INTS12Q96CB8 462 aaKnown RBP14.02□□□□□ -0.17
SMG5-204ENST00000476954 ZC3HAV1LQ96H79 300 aaKnown RBP14.02□□□□□ -0.17
SMG5-204ENST00000476954 SMIM10Q96HG1 83 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 BPIFA3Q9BQP9 254 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 ADAMTS6Q9UKP5 1117 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 TFR2Q9UP52 801 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 PRR14LQ5THK1 2151 aa14.02□□□□□ -0.17
SMG5-204ENST00000476954 TRBC2A0A5B9 178 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 E5RI56 91 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 ZBTB14O43829 449 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 GPRIN2O60269 458 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 ESR1P03372 595 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 IQCB1Q15051 598 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 ELAVL1Q15717 326 aaKnown RBP14.01□□□□□ -0.17
SMG5-204ENST00000476954 PIGGQ5H8A4 983 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 NIPAL1Q6NVV3 410 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 AGTRAPQ6RW13 159 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 PM20D2Q8IYS1 436 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 FAM47BQ8NA70 645 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 OR10G3Q8NGC4 313 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 OR4K1Q8NGD4 311 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 PEX13Q92968 403 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 NTNG2Q96CW9 530 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 MED18Q9BUE0 208 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 SFXN3Q9BWM7 321 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 PCBD2Q9H0N5 130 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 CALHM2Q9HA72 323 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 CLK4Q9HAZ1 481 aaKnown RBP14.01□□□□□ -0.17
SMG5-204ENST00000476954 EFR3BQ9Y2G0 817 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 MED16Q9Y2X0 877 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMG5-204ENST00000476954 CLCA3PQ9Y6N3 262 aa14.01□□□□□ -0.17
SMG5-204ENST00000476954 DYSFO75923 2080 aa14□□□□□ -0.17
SMG5-204ENST00000476954 YLPM1P49750 1951 aaKnown RBP14□□□□□ -0.17
SMG5-204ENST00000476954 H3BMM5 538 aa14□□□□□ -0.17
SMG5-204ENST00000476954 VAPBO95292 243 aa14□□□□□ -0.17
SMG5-204ENST00000476954 PLAUP00749 431 aa14□□□□□ -0.17
SMG5-204ENST00000476954 C1QAP02745 245 aa14□□□□□ -0.17
SMG5-204ENST00000476954 MPC1LP0DKB6 136 aa14□□□□□ -0.17
SMG5-204ENST00000476954 CCKARP32238 428 aa14□□□□□ -0.17
SMG5-204ENST00000476954 PTPN7P35236 360 aa14□□□□□ -0.17
SMG5-204ENST00000476954 SCTRP47872 440 aa14□□□□□ -0.17
SMG5-204ENST00000476954 CCR8P51685 355 aa14□□□□□ -0.17
SMG5-204ENST00000476954 HSD17B7P56937 341 aa14□□□□□ -0.17
SMG5-204ENST00000476954 SESN2P58004 480 aaPredicted RBP14□□□□□ -0.17
SMG5-204ENST00000476954 BTN3A2P78410 334 aa14□□□□□ -0.17
SMG5-204ENST00000476954 SF3B4Q15427 424 aaKnown RBP eCLIP14□□□□□ -0.171e-8■■■□□ 17.1
SMG5-204ENST00000476954 EIPR1Q53HC9 387 aa14□□□□□ -0.17
SMG5-204ENST00000476954 TOR1AIP1Q5JTV8 583 aa14□□□□□ -0.17
SMG5-204ENST00000476954 LCTLQ6UWM7 567 aa14□□□□□ -0.17
SMG5-204ENST00000476954 PRUNE1Q86TP1 453 aa14□□□□□ -0.17
SMG5-204ENST00000476954 ANKRD53Q8N9V6 530 aa14□□□□□ -0.17
SMG5-204ENST00000476954 FAM13CQ8NE31 585 aa14□□□□□ -0.17
SMG5-204ENST00000476954 ABHD11Q8NFV4 315 aa14□□□□□ -0.17
SMG5-204ENST00000476954 ROBO4Q8WZ75 1007 aa14□□□□□ -0.17
SMG5-204ENST00000476954 PYCR2Q96C36 320 aa14□□□□□ -0.17
SMG5-204ENST00000476954 SPACA9Q96E40 222 aaPredicted RBP14□□□□□ -0.17
SMG5-204ENST00000476954 TUBA1CQ9BQE3 449 aa14□□□□□ -0.17
SMG5-204ENST00000476954 SGPP1Q9BX95 441 aa14□□□□□ -0.17
SMG5-204ENST00000476954 NAT10Q9H0A0 1025 aaKnown RBP14□□□□□ -0.17
SMG5-204ENST00000476954 ZNF226Q9NYT6 803 aa14□□□□□ -0.17
SMG5-204ENST00000476954 ZFP69BQ9UJL9 534 aa14□□□□□ -0.17
SMG5-204ENST00000476954 CNOT11Q9UKZ1 510 aaKnown RBP14□□□□□ -0.17
SMG5-204ENST00000476954 CHCHD2Q9Y6H1 151 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms