RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CCNYL2Q5T2Q4 361 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 ATG14Q6ZNE5 492 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 OR11G2Q8NGC1 345 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 CHTF18Q8WVB6 975 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 ILKAPQ9H0C8 392 aaPredicted RBP27.81■■■□□ 2.04
HOXB3-208ENST00000476342 PRTFDC1Q9NRG1 225 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.81■■■□□ 2.04
HOXB3-208ENST00000476342 RAP2CQ9Y3L5 183 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 KCNMB2Q9Y691 235 aa27.81■■■□□ 2.04
HOXB3-208ENST00000476342 OR2W5A6NFC9 320 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 ARGFXA6NJG6 315 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 RGS14O43566 566 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 TMPRSS11DO60235 418 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 RSL1D1O76021 490 aaKnown RBP27.8■■■□□ 2.04
HOXB3-208ENST00000476342 GBAP04062 536 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 TPP2P29144 1249 aaPredicted RBP27.8■■■□□ 2.04
HOXB3-208ENST00000476342 HNRNPH2P55795 449 aaKnown RBP27.8■■■□□ 2.04
HOXB3-208ENST00000476342 TNFRSF17Q02223 184 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 TBR1Q16650 682 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 HSP90B2PQ58FF3 399 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 EXTL1Q92935 676 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 C8orf44Q96CB5 159 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 FBXL4Q9UKA2 621 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 LHX6Q9UPM6 363 aa27.8■■■□□ 2.04
HOXB3-208ENST00000476342 LOC102723996A0A087X1L8 192 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 SYNDIG1LA6NDD5 238 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 MAPK12P53778 367 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 BTG2P78543 158 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 SLC13A2Q13183 592 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 UGT3A2Q3SY77 523 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 APLFQ8IW19 511 aaPredicted RBP27.79■■■□□ 2.04
HOXB3-208ENST00000476342 DDIASQ8IXT1 998 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 APIPQ96GX9 242 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 ING2Q9H160 280 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 MANSC1Q9H8J5 431 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 WDR41Q9HAD4 459 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 PFDN4Q9NQP4 134 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 MCM8Q9UJA3 840 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 ASB4Q9Y574 426 aa27.79■■■□□ 2.04
HOXB3-208ENST00000476342 GUCY1B2O75343 617 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 BTKQ06187 659 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 DCAF10Q5QP82 559 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 SCUBE1Q8IWY4 988 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 ZNF781Q8N8C0 355 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 CLEC1AQ8NC01 280 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 TMEM52Q8NDY8 209 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 TSLPQ969D9 159 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 METTL2AQ96IZ6 378 aaKnown RBP27.78■■■□□ 2.04
HOXB3-208ENST00000476342 CCT7Q99832 543 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 ARHGAP9Q9BRR9 750 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 C20orf27Q9GZN8 174 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 TUBB1Q9H4B7 451 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 RPF2Q9H7B2 306 aaKnown RBP27.78■■■□□ 2.04
HOXB3-208ENST00000476342 ZNF395Q9H8N7 513 aaPredicted RBP27.78■■■□□ 2.04
HOXB3-208ENST00000476342 THAP1Q9NVV9 213 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 ATG4BQ9Y4P1 393 aa27.78■■■□□ 2.04
HOXB3-208ENST00000476342 PCSK5Q92824 1860 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 A0A1W2PQ72 361 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 PROM1O43490 865 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 MAOAP21397 527 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 HNRNPFP52597 415 aaKnown RBP27.77■■■□□ 2.04
HOXB3-208ENST00000476342 EEF1A2Q05639 463 aaKnown RBP27.77■■■□□ 2.04
HOXB3-208ENST00000476342 LANCL3Q6ZV70 420 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 NDUFAF7Q7L592 441 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 CPEB2Q7Z5Q1 589 aaKnown RBP27.77■■■□□ 2.04
HOXB3-208ENST00000476342 ANKRD37Q7Z713 158 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 DYDC1Q8WWB3 177 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 SORT1Q99523 831 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 PTGDR2Q9Y5Y4 395 aa27.77■■■□□ 2.04
HOXB3-208ENST00000476342 IGKV3D-11A0A0A0MRZ8 115 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 NPIPB8E9PQR5 432 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 PIP5K1BO14986 540 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 PCDH7O60245 1069 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 CTNSO60931 367 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 HPP00738 406 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 LINC00032P0C843 101 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 NR2F6P10588 404 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 COX6A1P12074 109 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 NR1D1P20393 614 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 PRPH2P23942 346 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 RPL14P50914 215 aaKnown RBP27.76■■■□□ 2.04
HOXB3-208ENST00000476342 C7orf57Q8NEG2 295 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 MESP1Q9BRJ9 268 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 INTS9Q9NV88 658 aaKnown RBP27.76■■■□□ 2.04
HOXB3-208ENST00000476342 RIC8BQ9NVN3 520 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 SIRT5Q9NXA8 310 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 HAO1Q9UJM8 370 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 CCL27Q9Y4X3 112 aa27.76■■■□□ 2.04
HOXB3-208ENST00000476342 IGHV1-45A0A0A0MS14 117 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 NSG1A0A0A6YYJ2 146 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 TCRBV16S1A1N1A0A5B0 115 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 ERVH48-1M5A8F1 160 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 PPP2R1BP30154 601 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 TIA1P31483 386 aaKnown RBP eCLIP27.75■■■□□ 2.032e-6■□□□□ 10.8
HOXB3-208ENST00000476342 TRA2BP62995 288 aaKnown RBP27.75■■■□□ 2.03
HOXB3-208ENST00000476342 NR6A1Q15406 480 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 CPZQ66K79 652 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 C18orf63Q68DL7 685 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 GALNT18Q6P9A2 607 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 TTC9Q92623 222 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms