RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PRSS42Q7Z5A4 293 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 SNX32Q86XE0 403 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 TREML1Q86YW5 311 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 LURAP1LQ8IV03 231 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 DSELQ8IZU8 1212 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 LIX1Q8N485 282 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 DNAJC22Q8N4W6 341 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 C1orf52Q8N6N3 182 aaKnown RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 ANKRD53Q8N9V6 530 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 OR4D9Q8NGE8 314 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 WDR36Q8NI36 951 aaKnown RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 FLVCR1-AS1Q8TAF5 88 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 NCSTNQ92542 709 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 GAL3ST3Q96A11 431 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 COQ8BQ96D53 544 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 MVB12AQ96EY5 273 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 PRR11Q96HE9 360 aaPredicted RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 TMEM74Q96NL1 305 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 TRAPPC9Q96Q05 1148 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 OR52E6Q96RD3 313 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 CCNL2Q96S94 520 aaPredicted RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 SERINC2Q96SA4 455 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 OR51B5Q9H339 312 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 MUC13Q9H3R2 512 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 RAD21L1Q9H4I0 556 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 REEP4Q9H6H4 257 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 FANCEQ9HB96 536 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 MYNNQ9NPC7 610 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 FARSBQ9NSD9 589 aaKnown RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 ARL8BQ9NVJ2 186 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 CUEDC1Q9NWM3 386 aaPredicted RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 ARMCX1Q9P291 453 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 PDP2Q9P2J9 529 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 CIDEBQ9UHD4 219 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 ATP6V1HQ9UI12 483 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 PHF11Q9UIL8 331 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 BTNL2Q9UIR0 455 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 G3BP2Q9UN86 482 aaKnown RBP6.67□□□□□ -1.34
SHQ1-207ENST00000475558 CORO2BQ9UQ03 480 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 RNF215Q9Y6U7 377 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 U3KQA8 63 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 DOPEY2Q9Y3R5 2298 aa6.67□□□□□ -1.34
SHQ1-207ENST00000475558 CCDC187A0A096LP49 1063 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 IGKV1-8A0A0C4DH67 115 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 A0A1W2PNU3 283 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 C1orf226A1L170 272 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 EVPLLA8MZ36 301 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 H0YGG7 62 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 RNASET2O00584 256 aaKnown RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 ANKRD28O15084 1053 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 NDUFS4O43181 175 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 B4GAT1O43505 415 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 B3GALT2O43825 422 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 PCDH7O60245 1069 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 CIB2O75838 187 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 SLITRK5O94991 958 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 TNFSF15O95150 251 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 SCELO95171 688 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 CBX6O95503 412 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 SERPIND1P05546 499 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 KLK1P06870 262 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 CD63P08962 238 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 ANKRD34CP0C6C1 535 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 ZCCHC18P0CG32 403 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 SMIM10L1P0DMW3 83 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 PIM1P11309 404 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 MYF5P13349 255 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 NQO1P15559 274 aaKnown RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 TYRP1P17643 537 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 DDCP20711 480 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 MAGP20916 626 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 HIST1H1TP22492 207 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 CD1CP29017 333 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 PEBP1P30086 187 aaKnown RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 MPIP34949 423 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 BSGP35613 385 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 BCL6P41182 706 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 BUD31P41223 144 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 AVPR1BP47901 424 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 ANXA11P50995 505 aaKnown RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 ARF3P61204 181 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 UFM1P61960 85 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 C2orf80Q0P641 193 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 TRAP1Q12931 704 aaKnown RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 CLN3Q13286 438 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 MLC1Q15049 377 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 TLR1Q15399 786 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 MUM1Q2TAK8 710 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 LINC01559Q495D7 138 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 VPS26BQ4G0F5 336 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 SAMD4BQ5PRF9 694 aaKnown RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 TMEM198Q66K66 360 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 FCRL6Q6DN72 434 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 GUSBP11Q6P575 273 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 FOXR1Q6PIV2 292 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 ZNF574Q6ZN55 896 aaPredicted RBP6.66□□□□□ -1.34
SHQ1-207ENST00000475558 USP53Q70EK8 1073 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 COMMD6Q7Z4G1 85 aa6.66□□□□□ -1.34
SHQ1-207ENST00000475558 FUNDC1Q8IVP5 155 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms