RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 LPAL2Q16609 132 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 AMZ1Q400G9 498 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 DEFB134Q4QY38 66 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ZFP1Q6P2D0 407 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 CYP2R1Q6VVX0 501 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 CALHM3Q86XJ0 350 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 PROSER1Q86XN7 944 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 PYDC1Q8WXC3 89 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ZBED6CLQ96FA7 236 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF583Q96ND8 569 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 MAPKAP1Q9BPZ7 522 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 PIF1Q9H611 641 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 KAT8Q9H7Z6 458 aaKnown RBP13.01□□□□□ -0.33
TRAF4-210ENST00000475329 TAS2R9Q9NYW1 312 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 STX18Q9P2W9 335 aaKnown RBP13.01□□□□□ -0.33
TRAF4-210ENST00000475329 KLHL3Q9UH77 587 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 GMEB2Q9UKD1 530 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 PLCL2Q9UPR0 1127 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ATG4BQ9Y4P1 393 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 GMEB1Q9Y692 573 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 SLC22A7Q9Y694 548 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 SCN2AQ99250 2005 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 UNC13CQ8NB66 2214 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 LY6G6EA0A0G2JKS1 128 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 TCRBV3S1A0A5B6 114 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 AQP12BA6NM10 295 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 GSTA4O15217 222 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 PROM1O43490 865 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 HCRTR1O43613 425 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 GMNNO75496 209 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ANPEPP15144 967 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 CD1CP29017 333 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 CSF2RBP32927 897 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 SOAT1P35610 550 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 PLA2G5P39877 138 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 MPLP40238 635 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 BUD31P41223 144 aaPredicted RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 GABRA4P48169 554 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ARL4DP49703 201 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 PCBP4P57723 403 aaKnown RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 SKP1P63208 163 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 NDUFA9Q16795 377 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 CYP51A1Q16850 503 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 GUSBP11Q6P575 273 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 WDR74Q6RFH5 385 aaPredicted RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 GPR155Q7Z3F1 870 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 PRSS42Q7Z5A4 293 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 AQP12AQ8IXF9 295 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 MICU2Q8IYU8 434 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 EID2Q8N6I1 236 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ZFP28Q8NHY6 868 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ZFP90Q8TF47 636 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 N4BP2L2Q92802 583 aaPredicted RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 NAT6Q93015 286 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 REXO5Q96IC2 774 aaKnown RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF285Q96NJ3 590 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 SLC35A5Q9BS91 424 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 SPATA9Q9BWV2 254 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 RAD21L1Q9H4I0 556 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 TPT1P8Q9HAU6 139 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 LYRM4Q9HD34 91 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 NEUROD4Q9HD90 331 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ACSS1Q9NUB1 689 aaPredicted RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 GIMAP4Q9NUV9 329 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 DNAAF2Q9NVR5 837 aaKnown RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 MS4A12Q9NXJ0 267 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 C5AR2Q9P296 337 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 UTS2RQ9UKP6 389 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 USP22Q9UPT9 525 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ENTPD4Q9Y227 616 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 MRPS2Q9Y399 296 aaKnown RBP13□□□□□ -0.33
TRAF4-210ENST00000475329 PCDHGA5Q9Y5G8 931 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 U3KQA8 63 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 SPACA6W5XKT8 324 aa13□□□□□ -0.33
TRAF4-210ENST00000475329 ASXL3Q9C0F0 2248 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 ELOVL7A1L3X0 281 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 CPED1A4D0V7 1026 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 PCDHGA12O60330 932 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GALR3O60755 368 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 PRKRAO75569 313 aaKnown RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 NCK1P16333 377 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GPX2P18283 190 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GGT1P19440 569 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 UQCRC2P22695 453 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 CPN2P22792 545 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 TLX1P31314 330 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 CHI3L1P36222 383 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 GZMMP51124 257 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 MANFP55145 182 aaKnown RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 LIM2P55344 173 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 POLE2P56282 527 aa12.99□□□□□ -0.33
TRAF4-210ENST00000475329 SNRPNP63162 240 aaKnown RBP12.99□□□□□ -0.33
TRAF4-210ENST00000475329 RHDQ02161 417 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms