RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SMIM18P0DKX4 95 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CD8BP10966 210 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLC2A4P14672 509 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 PAX1P15863 534 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LBPP18428 481 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 KLRC1P26715 233 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 APEX1P27695 318 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 GABRB3P28472 473 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 VEGFCP49767 419 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 DLX5P56178 289 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 MRPS22P82650 360 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 TNK2Q07912 1038 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GPR19Q15760 415 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 NDUFA9Q16795 377 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GALNTL6Q49A17 601 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 Q5BKY6 102 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 WASHC2DQ5SRD0 308 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 HP1BP3Q5SSJ5 553 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM46CQ5VWP2 391 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CST9LP1Q5W188 147 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 HSDL2Q6YN16 418 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SIRT2Q8IXJ6 389 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 PUSL1Q8N0Z8 303 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 PARP8Q8N3A8 854 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SVOPLQ8N434 492 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CCDC197Q8NCU1 140 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SFT2D1Q8WV19 159 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TFAP2BQ92481 460 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 OSTF1Q92882 214 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLC38A4Q969I6 547 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SPSB1Q96BD6 273 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CERS2Q96G23 380 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 HARBI1Q96MB7 349 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TMED9Q9BVK6 235 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LRRC2Q9BYS8 371 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLC38A1Q9H2H9 487 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 OSER1Q9NX31 292 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ADA2Q9NZK5 511 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LRIT1Q9P2V4 623 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 DHCR7Q9UBM7 475 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 SERTAD1Q9UHV2 236 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 MMP24Q9Y5R2 645 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ALG6Q9Y672 507 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CASZ1Q86V15 1759 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 MROH7-TTC4A0A0A0MT08 1334 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 WDR33Q9C0J8 1336 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 YLPM1P49750 1951 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 FITM1A5D6W6 292 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ANKRD66B4E2M5 251 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CAPN5O15484 640 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 DYRK3O43781 588 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 RNASEH1O60930 286 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 IGF2P01344 180 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ACSM4P0C7M7 580 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ELFN1P0C7U0 828 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 HSPD1P10809 573 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 FGF5P12034 268 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CDH2P19022 906 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 TBXA2RP21731 343 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 RPL5P46777 297 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 RFX5P48382 616 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 KCNJ3P48549 501 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FLT3LGP49771 235 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CRYBA4P53673 196 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FCGRTP55899 365 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TIRAPP58753 221 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 PPIAP62937 165 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 CDC42EP1Q00587 391 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 APOFQ13790 326 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 PTGR1Q14914 329 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CCDC6Q16204 474 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 EXT1Q16394 746 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 NTRK2Q16620 822 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ZBED5Q49AG3 693 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 DMRTA1Q5VZB9 504 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TIGD3Q6B0B8 471 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM199XQ6PEV8 388 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 HAUS6Q7Z4H7 955 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ARHGAP12Q8IWW6 846 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 KLHL7Q8IXQ5 586 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CFAP206Q8IYR0 622 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLC35F6Q8N357 371 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TMEM116Q8NCL8 245 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 BEND2Q8NDZ0 799 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 OR5T2Q8NGG2 359 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 OR11L1Q8NGX0 322 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 NFKBIDQ8NI38 313 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ASB5Q8WWX0 329 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 DCPSQ96C86 337 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 RNFT2Q96EX2 444 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GAD1Q99259 594 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 PIGQQ9BRB3 760 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SMOC2Q9H3U7 446 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GPN2Q9H9Y4 310 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 ZNF556Q9HAH1 456 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 JPH1Q9HDC5 661 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM118AQ9NWS6 357 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 KLK14Q9P0G3 267 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GPR160Q9UJ42 338 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FZD4Q9ULV1 537 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms