RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 AP5B1Q2VPB7 878 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 LAS2Q8IYD9 372 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 MORN4Q8NDC4 146 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 RHEBL1Q8TAI7 183 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 CMTM7Q96FZ5 175 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 CSF3RQ99062 836 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 IGSF5Q9NSI5 407 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 KCMF1Q9P0J7 381 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 ZNF223Q9UK11 482 aaPredicted RBP18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 MEMO1Q9Y316 297 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 LRBAP50851 2863 aa18.96■□□□□ 0.63
PDLIM4-206ENST00000474421 A0A087X1B8 175 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 UBXN8O00124 270 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 PRRG2O14669 202 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 TFECO14948 347 aaPredicted RBP18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 PEX1O43933 1283 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 SCELO95171 688 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 PCNAP12004 261 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 EPB42P16452 691 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 ATP5A1P25705 553 aaKnown RBP18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 GUCY2DQ02846 1103 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 DLG1Q12959 904 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 ZNF630Q2M218 657 aaPredicted RBP18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 RNFT1Q5M7Z0 435 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 HSDL2Q6YN16 418 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 SULF2Q8IWU5 870 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 ACOT4Q8N9L9 421 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 CENPKQ9BS16 269 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 ALOXE3Q9BYJ1 711 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 ERVK-11Q9UQG0 969 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 ASB1Q9Y576 335 aa18.95■□□□□ 0.62
PDLIM4-206ENST00000474421 A8MVJ9 347 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 TUBB4AP04350 444 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 HIST1H1TP22492 207 aaPredicted RBP18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 ADORA2A-AS1P86434 159 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 GRHL2Q6ISB3 625 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 CEP128Q6ZU80 1094 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 UBE3DQ7Z6J8 389 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 OR7G3Q8NG95 312 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 OR8K3Q8NH51 312 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 ASB15Q8WXK1 588 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 HPF1Q9NWY4 346 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 MS4A12Q9NXJ0 267 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 MYOTQ9UBF9 498 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 ANGPTL3Q9Y5C1 460 aa18.94■□□□□ 0.62
PDLIM4-206ENST00000474421 PKDREJQ9NTG1 2253 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 OR2J2O76002 312 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 TGFB1P01137 390 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 COX7A2P14406 83 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 TNNI3P19429 210 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 PHBP35232 272 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 PTGER4P35408 488 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 GMPRP36959 345 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 PIK3CBP42338 1070 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 SSR2P43308 183 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 BIKQ13323 160 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 TRADDQ15628 312 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 MROH9Q5TGP6 573 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 KHDRBS2Q5VWX1 349 aaKnown RBP18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 C8orf74Q6P047 294 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 KLC3Q6P597 504 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 ZNF793Q6ZN11 406 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 ZFP62Q8NB50 900 aaPredicted RBP18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 OR5L2Q8NGL0 311 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 C16orf52Q8NHV5 167 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 PHF10Q8WUB8 498 aaKnown RBP18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 PTPMT1Q8WUK0 201 aaPredicted RBP18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 NXNL1Q96CM4 212 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 MAPKAP1Q9BPZ7 522 aa18.93■□□□□ 0.62
PDLIM4-206ENST00000474421 C17orf105B2RV13 164 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 E9PLN8 166 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 C2P06681 752 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 GFAPP14136 432 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 CPN2P22792 545 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 GRNP28799 593 aaKnown RBP18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 RAP1GDS1P52306 607 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 ARFIP1P53367 373 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 PHEXP78562 749 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 ACAP2Q15057 778 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 DEPDC1Q5TB30 811 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 LIPJQ5W064 366 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 MDGA2Q7Z553 956 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 MCEMP1Q8IX19 187 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 CENPLQ8N0S6 344 aaPredicted RBP18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 TEX9Q8N6V9 391 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 AGAP11Q8TF27 550 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 KCTD4Q8WVF5 259 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 RGMAQ96B86 450 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 REPS1Q96D71 796 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 VKORC1Q9BQB6 163 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 OR8D2Q9GZM6 311 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 COPS7AQ9UBW8 275 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 TSC22D4Q9Y3Q8 395 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 PCDHGA11Q9Y5H2 935 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 ABCA12Q86UK0 2595 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 CACNA1CQ13936 2221 aa18.92■□□□□ 0.62
PDLIM4-206ENST00000474421 TMEM200CA6NKL6 621 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 RTCAO00442 366 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms