RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LIM2P55344 173 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 HNRNPH2P55795 449 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 NCALDP61601 193 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 OLR1P78380 273 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SHC2P98077 582 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PLIN5Q00G26 463 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SLC13A2Q13183 592 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 EIF3IQ13347 325 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 MAP7Q14244 749 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 UGT8Q16880 541 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 TMEM164Q5U3C3 297 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ANKRD26P1Q6NSI1 321 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SLC2A7Q6PXP3 512 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 CEACAM20Q6UY09 585 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 HACD2Q6Y1H2 254 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 DNAJC14Q6Y2X3 702 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF574Q6ZN55 896 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 RINLQ6ZS11 566 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SZRD1Q7Z422 152 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 CAMKMTQ7Z624 323 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 FUNDC1Q8IVP5 155 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 METTL27Q8N6F8 245 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 RBM15BQ8NDT2 890 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 DEFB124Q8NES8 71 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 TM4SF18Q96CE8 201 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF501Q96CX3 271 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF764Q96H86 408 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 TEX37Q96LM6 180 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF285Q96NJ3 590 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 MAPKAP1Q9BPZ7 522 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF717Q9BY31 904 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 MMADHCQ9H3L0 296 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 RAD21L1Q9H4I0 556 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ACTL8Q9H568 366 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF304Q9HCX3 659 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 NEUROD4Q9HD90 331 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SPAG4Q9NPE6 437 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PRDM9Q9NQV7 894 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SEMA3GQ9NS98 782 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 TEX10Q9NXF1 929 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SLC39A1Q9NY26 324 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 HCN3Q9P1Z3 774 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF282Q9UDV7 671 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 BCAP29Q9UHQ4 241 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 GPN3Q9UHW5 284 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 CDV3Q9UKY7 258 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PRPF19Q9UMS4 504 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 AP3M1Q9Y2T2 418 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PCDHA9Q9Y5H5 950 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ADAMTS20P59510 1910 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 SYNDIG1LA6NDD5 238 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 GLOD5A6NK44 160 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 GABRR3A8MPY1 467 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 C4orf51C9J302 202 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 DYRK3O43781 588 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 OR10H2O60403 315 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 TBX19O60806 448 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 CBFA2T3O75081 653 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 CPNE3O75131 537 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 CSO75390 466 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC34A2O95436 690 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 TBX6O95947 436 aaPredicted RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 B3GALT4O96024 378 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 KLK3P07288 261 aaPredicted RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SMIM10L1P0DMW3 83 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 LAMP1P11279 417 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 CSNK2A2P19784 350 aaPredicted RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 IL10P22301 178 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 IL12AP29459 219 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 MPIP34949 423 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 GABRA4P48169 554 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 TRPC1P48995 793 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ANXA11P50995 505 aaKnown RBP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 NCBP2P52298 156 aaKnown RBP eCLIP9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 MAPK10P53779 464 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 PSME3P61289 254 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC25A3Q00325 362 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 MC1RQ01726 317 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 OCA2Q04671 838 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 STX4Q12846 297 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 DCAF12Q5T6F0 453 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC48A1Q6P1K1 146 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 BHLHB9Q6PI77 547 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 RIPOR1Q6ZS17 1223 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ZNF621Q6ZSS3 439 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 DGLUCYQ7Z3D6 616 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 TMPRSS9Q7Z410 1059 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ANKRD46Q86W74 232 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 RIMKLAQ8IXN7 391 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ZNF595Q8IYB9 648 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 CA13Q8N1Q1 262 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 OR4K14Q8NGD5 310 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 TANKQ92844 425 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 LRRC58Q96CX6 371 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 PEX11GQ96HA9 241 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SMIM10Q96HG1 83 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC45A3Q96JT2 553 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 C10orf90Q96M02 699 aa9.71□□□□□ -0.86
PRPF38A-202ENST00000474048 ZPBPQ9BS86 351 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms