RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 KCTD19Q17RG1 926 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SWI5Q1ZZU3 235 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 HYAL4Q2M3T9 481 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 BBS9Q3SYG4 887 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CATSPEREQ5SY80 951 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 WLSQ5T9L3 541 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SEL1L2Q5TEA6 688 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 HECTD2Q5U5R9 776 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ARMC3Q5W041 872 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 LRRC8EQ6NSJ5 796 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 POMZP3Q6PJE2 187 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 LYPD4Q6UWN0 246 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 RAD9BQ6WBX8 426 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SEM1Q6ZVN7 128 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CHSY3Q70JA7 882 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ULK2Q8IYT8 1036 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CA13Q8N1Q1 262 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TBC1D19Q8N5T2 526 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 GOLM1Q8NBJ4 401 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 NAXEQ8NCW5 288 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TMEM52Q8NDY8 209 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 OR56A3Q8NH54 315 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 EEF1AKMT1Q8WVE0 214 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 RNASE6Q93091 150 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 NEIL2Q969S2 332 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ALKBH8Q96BT7 664 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SARAFQ96BY9 339 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 PYCR2Q96C36 320 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SNF8Q96H20 258 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SCYL1Q96KG9 808 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 COX4I2Q96KJ9 171 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SGCZQ96LD1 299 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM173AQ9BQD7 235 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CCDC77Q9BR77 488 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CCDC68Q9H2F9 335 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 RHBGQ9H310 441 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 KLHL31Q9H511 634 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 LDAHQ9H6V9 325 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF703Q9H7S9 590 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 PARVBQ9HBI1 364 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 NEUROD4Q9HD90 331 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ADAP2Q9NPF8 381 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 PNO1Q9NRX1 252 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TUBA8Q9NY65 449 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SAMD15Q9P1V8 674 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TRMT6Q9UJA5 497 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ZFP69BQ9UJL9 534 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ATG4BQ9Y4P1 393 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 COMMD10Q9Y6G5 202 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CAPN6Q9Y6Q1 641 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TRGV5A0A0B4J1U4 118 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ZCWPW2A0A1B0GU75 182 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 A0A1W2PPR1 153 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 URADA6NGE7 173 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 TUBAL3A6NHL2 446 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 LRRC3CA6NJW4 275 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CLCA1A8K7I4 914 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 HSPB2A8KAH6 182 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 KDM4EB2RXH2 506 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 DVL2O14641 736 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ARHGEF9O43307 516 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 NRDCO43847 1150 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 HAUS5O94927 633 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 GOSR1O95249 250 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 LY6G6DO95868 133 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 HRGP04196 525 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SERPINA6P08185 405 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 EPXP11678 715 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 VAMP1P23763 118 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 PCSK6P29122 969 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CEACAM8P31997 349 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 MAGEA6P43360 314 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 RGS4P49798 205 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 HSD17B7P56937 341 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 NKX6-1P78426 367 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CCZ1BP86790 482 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CCZ1P86791 482 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SORDQ00796 357 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 THOC5Q13769 683 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 DHX34Q14147 1143 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC10A1Q14973 349 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 PCBP2Q15366 365 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ELAVL1Q15717 326 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 HSPB2Q16082 182 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CCNG2Q16589 344 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF750Q32MQ0 723 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 ACSF3Q4G176 576 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 SHEQ5VZ18 495 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXW10Q5XX13 1052 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 DUPD1Q68J44 220 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CASC4Q6P4E1 433 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 DRICH1Q6PGQ1 229 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 C4orf22Q6V702 233 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 HSDL2Q6YN16 418 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 RTL4Q6ZR62 310 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM47EQ6ZV65 393 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 KIAA1328Q86T90 577 aa4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CAND1Q86VP6 1230 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-204ENST00000474025 CXorf67Q86X51 503 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms