RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TTLL8A6PVC2 850 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 CLDN4O14493 209 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 MAN1A2O60476 641 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 LDB3O75112 727 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 PRKRAO75569 313 aaKnown RBP17.72■□□□□ 0.43
PTCD3-210ENST00000473829 F10P00742 488 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 PDYNP01213 254 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 CCT5P48643 541 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 ARFIP1P53367 373 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 IFT88Q13099 833 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 CCDC153Q494R4 210 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 MRM1Q6IN84 353 aaKnown RBP17.72■□□□□ 0.43
PTCD3-210ENST00000473829 H3F3CQ6NXT2 135 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 GPRIN3Q6ZVF9 776 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 EFCAB3Q8N7B9 438 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 CDYL2Q8N8U2 506 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 CATSPER1Q8NEC5 780 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 ARMC2Q8NEN0 867 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 LMF1Q96S06 567 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 SERPINI1Q99574 410 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 CENPKQ9BS16 269 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 ELOVL6Q9H5J4 265 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 DDX31Q9H8H2 851 aaKnown RBP17.72■□□□□ 0.43
PTCD3-210ENST00000473829 KCNK13Q9HB14 408 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 MKS1Q9NXB0 559 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 ATG4BQ9Y4P1 393 aa17.72■□□□□ 0.43
PTCD3-210ENST00000473829 NBASA2RRP1 2371 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 A8MUI8 341 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 UBFD1O14562 309 aaKnown RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 CTNSO60931 367 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 SEMA3DO95025 777 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 GBAP04062 536 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 UQCRHP07919 91 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 CPN2P22792 545 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 HTR6P50406 440 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 AP2B1P63010 937 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 FOXK1P85037 733 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 TNFRSF17Q02223 184 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ID2Q02363 134 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 LCP2Q13094 533 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 RCN2Q14257 317 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 C18orf63Q68DL7 685 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 SRRM1Q8IYB3 904 aaKnown RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 CCNYL1Q8N7R7 359 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 BANPQ8N9N5 519 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 MYRIPQ8NFW9 859 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ELP5Q8TE02 316 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 MIB2Q96AX9 1013 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ANKRD9Q96BM1 317 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 APOPT1Q96IL0 206 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 CNDP1Q96KN2 507 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 KCNA7Q96RP8 456 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 MRPL1Q9BYD6 325 aaKnown RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ROPN1BQ9BZX4 212 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ILKAPQ9H0C8 392 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ROPN1Q9HAT0 212 aaPredicted RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 SLAMF7Q9NQ25 335 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 PNO1Q9NRX1 252 aaKnown RBP17.71■□□□□ 0.43
PTCD3-210ENST00000473829 ASB4Q9Y574 426 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 PCDHGA10Q9Y5H3 936 aa17.71■□□□□ 0.43
PTCD3-210ENST00000473829 MANBAO00462 879 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 FGF17O60258 216 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 MYO1DO94832 1006 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 MLYCDO95822 493 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 WDPCPO95876 746 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 CPA3P15088 417 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 DEKP35659 375 aaKnown RBP17.7■□□□□ 0.42
PTCD3-210ENST00000473829 ST13P50502 369 aaKnown RBP17.7■□□□□ 0.42
PTCD3-210ENST00000473829 ZNF33BQ06732 778 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 ZNF844Q08AG5 666 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 PCLAFQ15004 111 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 INPP5JQ15735 1006 aaPredicted RBP17.7■□□□□ 0.42
PTCD3-210ENST00000473829 C10orf62Q5T681 223 aaPredicted RBP17.7■□□□□ 0.42
PTCD3-210ENST00000473829 GPR180Q86V85 440 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 NUDT13Q86X67 352 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 CRLF3Q8IUI8 442 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 CCDC63Q8NA47 563 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 APCDD1LQ8NCL9 501 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 DNAJB14Q8TBM8 379 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 RDH11Q8TC12 318 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 CPT1CQ8TCG5 803 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 AGAP11Q8TF27 550 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 SELENOMQ8WWX9 145 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 CCDC126Q96EE4 140 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 TMEM109Q9BVC6 243 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 ZNF223Q9UK11 482 aaPredicted RBP17.7■□□□□ 0.42
PTCD3-210ENST00000473829 SNX6Q9UNH7 406 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 SLC12A4Q9UP95 1085 aa17.7■□□□□ 0.42
PTCD3-210ENST00000473829 UBR5O95071 2799 aaPredicted RBP17.7■□□□□ 0.42
PTCD3-210ENST00000473829 PRRC2CQ9Y520 2896 aaKnown RBP17.69■□□□□ 0.42
PTCD3-210ENST00000473829 SPAG7O75391 227 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 WISP1O95388 367 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 FAM58BPP0C7Q3 252 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 CHN1P15882 459 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 CREB1P16220 341 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 TPP2P29144 1249 aaPredicted RBP17.69■□□□□ 0.42
PTCD3-210ENST00000473829 NAGLUP54802 743 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 DNAJB13P59910 316 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 ARG2P78540 354 aa17.69■□□□□ 0.42
PTCD3-210ENST00000473829 ACER2Q5QJU3 275 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms