RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PROM1O43490 865 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SNX3O60493 162 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 B4GALT2O60909 372 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 RAB40ALP0C0E4 278 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 G6PDP11413 515 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SDC1P18827 310 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 PRPS1L1P21108 318 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 PCBP4P57723 403 aaKnown RBP15.91■□□□□ 0.14
CCM2-205ENST00000472223 TNFRSF17Q02223 184 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 KLC1Q07866 573 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SLC13A2Q13183 592 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SYT16Q17RD7 645 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 MINDY4Q4G0A6 757 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 NDUFAF5Q5TEU4 345 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 ZNF385CQ66K41 422 aaPredicted RBP15.91■□□□□ 0.14
CCM2-205ENST00000472223 MRM1Q6IN84 353 aaKnown RBP15.91■□□□□ 0.14
CCM2-205ENST00000472223 CGB2Q6NT52 195 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 FAM199XQ6PEV8 388 aaPredicted RBP15.91■□□□□ 0.14
CCM2-205ENST00000472223 ERMP1Q7Z2K6 904 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 ZNF595Q8IYB9 648 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 MIER2Q8N344 545 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 DTWD1Q8N5C7 304 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 ANKS4BQ8N8V4 417 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 FAM47BQ8NA70 645 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 STT3BQ8TCJ2 826 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 METTL21AQ8WXB1 218 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 FGF11Q92914 225 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 TM4SF18Q96CE8 201 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 C11orf24Q96F05 449 aaPredicted RBP15.91■□□□□ 0.14
CCM2-205ENST00000472223 FCRL1Q96LA6 429 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 GPR87Q9BY21 358 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SPRY4Q9C004 299 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 TGIF2Q9GZN2 237 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SLC26A1Q9H2B4 701 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 RPF2Q9H7B2 306 aaKnown RBP15.91■□□□□ 0.14
CCM2-205ENST00000472223 KCNK13Q9HB14 408 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 PRDM9Q9NQV7 894 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 GIMAP4Q9NUV9 329 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 ATG4BQ9Y4P1 393 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 SEC16AO15027 2179 aa15.91■□□□□ 0.14
CCM2-205ENST00000472223 PRMT3O60678 531 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 CCDC22O60826 627 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 HEXBP07686 556 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 IL3P08700 152 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 ZGLP1P0C6A0 271 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 DLSTP36957 453 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 STAT5AP42229 794 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 CLNS1AP54105 237 aaKnown RBP15.9■□□□□ 0.14
CCM2-205ENST00000472223 HNRNPH2P55795 449 aaKnown RBP15.9■□□□□ 0.14
CCM2-205ENST00000472223 STX4Q12846 297 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 BIKQ13323 160 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 NCF4Q15080 339 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 OR52E8Q6IFG1 317 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 TIPARPQ7Z3E1 657 aaKnown RBP15.9■□□□□ 0.14
CCM2-205ENST00000472223 SAMD14Q8IZD0 417 aaPredicted RBP15.9■□□□□ 0.14
CCM2-205ENST00000472223 BCAS4Q8TDM0 211 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 VPS50Q96JG6 964 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 CATSPER2Q96P56 530 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 CCDC86Q9H6F5 360 aaKnown RBP15.9■□□□□ 0.14
CCM2-205ENST00000472223 PRTFDC1Q9NRG1 225 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 ATAD3AQ9NVI7 634 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 AIG1Q9NVV5 245 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 KCMF1Q9P0J7 381 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 BAIAP2L1Q9UHR4 511 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 WASF3Q9UPY6 502 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 FARSAQ9Y285 508 aaKnown RBP15.9■□□□□ 0.14
CCM2-205ENST00000472223 ARL2BPQ9Y2Y0 163 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 PCDHA9Q9Y5H5 950 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 ZNF780BQ9Y6R6 833 aa15.9■□□□□ 0.14
CCM2-205ENST00000472223 A0A1W2PR48 441 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 BMP10O95393 424 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 IGHEP01854 428 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 PIK3R1P27986 724 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 FOLR3P41439 243 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 DIO3P55073 304 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 CLDN8P56748 225 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 HSD17B7P56937 341 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 NKG7Q16617 165 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 VWA2Q5GFL6 755 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 C18orf63Q68DL7 685 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 ZNF517Q6ZMY9 492 aaPredicted RBP15.89■□□□□ 0.13
CCM2-205ENST00000472223 PRSS58Q8IYP2 241 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 NATD1Q8N6N6 113 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 CLHC1Q8NHS4 586 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 CT55Q8WUE5 264 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 C10orf82Q8WW14 230 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 NKD1Q969G9 470 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 PPCDCQ96CD2 204 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 MTERF3Q96E29 417 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 RBCK1Q9BYM8 510 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 REEP4Q9H6H4 257 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 GPN2Q9H9Y4 310 aaPredicted RBP15.89■□□□□ 0.13
CCM2-205ENST00000472223 TEX10Q9NXF1 929 aaPredicted RBP15.89■□□□□ 0.13
CCM2-205ENST00000472223 EHD3Q9NZN3 535 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 HEY2Q9UBP5 337 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 CROTQ9UKG9 612 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 MKL2Q9ULH7 1088 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 PTRH2Q9Y3E5 179 aaKnown RBP15.89■□□□□ 0.13
CCM2-205ENST00000472223 MMACHCQ9Y4U1 282 aa15.89■□□□□ 0.13
CCM2-205ENST00000472223 SDK2Q58EX2 2172 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms