RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	METTL7B	Q6UX53	244 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	SERPINA12	Q8IW75	414 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044		Q8NBF4	154 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	AQP11	Q8NBQ7	271 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	GPR148	Q8TDV2	347 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	ATP8B4	Q8TF62	1192 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	LRRC15	Q8TF66	581 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	UBTD2	Q8WUN7	234 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	PRCC	Q92733	491 aa	Predicted RBP	3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	AGAP3	Q96P47	875 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	ERGIC2	Q96RQ1	377 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	FAM213A	Q9BRX8	229 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	GFRA4	Q9GZZ7	299 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	MARCH7	Q9H992	704 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	THAP10	Q9P2Z0	257 aa	Predicted RBP	3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	TRIM10	Q9UDY6	481 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	BAIAP2L1	Q9UHR4	511 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	EXOC7	Q9UPT5	735 aa		3.18	□□□□□ -1.9
PTCD3-209	ENST00000472044	IGHV3OR16-10	A0A075B7F0	116 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	KRTAP16-1	A8MUX0	517 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	SLC28A1	O00337	649 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	VEGFD	O43915	354 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	SNAP91	O60641	907 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	FER	P16591	822 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	RPL9	P32969	192 aa	Known RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	ZFP36L2	P47974	494 aa	Known RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	SMS	P52788	366 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	HSPA14	Q0VDF9	509 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	AP1B1	Q10567	949 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	CBX3	Q13185	183 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	MS4A18	Q3C1V0	323 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	TEX35	Q5T0J7	233 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	FAM182A	Q5T1J6	154 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044		Q71RC1	249 aa	Predicted RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	CARM1	Q86X55	608 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	STH	Q8IWL8	128 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	PHC2	Q8IXK0	858 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	ZNF440	Q8IYI8	595 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	OR6F1	Q8NGZ6	308 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	GOLGA5	Q8TBA6	731 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	SPPL2A	Q8TCT8	520 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	LIPH	Q8WWY8	451 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	SLCO4A1	Q96BD0	722 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	ZNF274	Q96GC6	653 aa	Predicted RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	ALKBH3	Q96Q83	286 aa	Predicted RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	PKP2	Q99959	881 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	RBM4B	Q9BQ04	359 aa	Known RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	IL1RAP	Q9NPH3	570 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	ACOXL	Q9NUZ1	547 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	MED17	Q9NVC6	651 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	NUDT4	Q9NZJ9	180 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	MRPS2	Q9Y399	296 aa	Known RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	OR1A2	Q9Y585	309 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	TEX264	Q9Y6I9	313 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	ABCC9	O60706	1549 aa		3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	SPAG9	O60271	1321 aa	Known RBP	3.17	□□□□□ -1.9
PTCD3-209	ENST00000472044	TRBV2	A0A0J9YWF9	115 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044		A0A0J9YWU9	116 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	SHISA7	A6NL88	538 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	CHRNG	P07510	517 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	SERPINF2	P08697	491 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	THEGL	P0DJG4	465 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	B4GALT1	P15291	398 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	STIP1	P31948	543 aa	Known RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	ALDH3B1	P43353	468 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	RBBP4	Q09028	425 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	ZNF146	Q15072	292 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	C1orf189	Q5VU69	101 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	RABEPK	Q7Z6M1	372 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	FAM131B	Q86XD5	332 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	TBC1D10C	Q8IV04	446 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	CCDC197	Q8NCU1	140 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	MAPK1IP1L	Q8NDC0	245 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	OR52B6	Q8NGF0	335 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	GLYATL1	Q969I3	302 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	ZNF689	Q96CS4	500 aa	Predicted RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	SLC45A3	Q96JT2	553 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	RAB40C	Q96S21	281 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	NAP1L3	Q99457	506 aa	Predicted RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	SPAG8	Q99932	426 aa	Predicted RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	AGPAT1	Q99943	283 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	TRIM15	Q9C019	465 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	GAN	Q9H2C0	597 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	DBNDD1	Q9H9R9	158 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	GPN1	Q9HCN4	374 aa	Predicted RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	KCNMB3	Q9NPA1	279 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	TRMT6	Q9UJA5	497 aa	Known RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	TSPAN16	Q9UKR8	245 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	TDRKH	Q9Y2W6	561 aa	Known RBP	3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	SH3GLB1	Q9Y371	365 aa		3.16	□□□□□ -1.9
PTCD3-209	ENST00000472044	IGKV3D-15	A0A087WSY6	115 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	SLC9B1P1	A6NJY1	282 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	ASB14	A6NK59	587 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	ARHGEF33	A8MVX0	844 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	NTN3	O00634	580 aa	Predicted RBP	3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	OGT	O15294	1046 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	CXCL14	O95715	111 aa		3.15	□□□□□ -1.91
PTCD3-209	ENST00000472044	TXNDC12	O95881	172 aa		3.15	□□□□□ -1.91

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