RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 NKX6-1P78426 367 aaPredicted RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 MSLNQ13421 630 aaPredicted RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 GRB7Q14451 532 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 CHI3L2Q15782 390 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SYT16Q17RD7 645 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 HKDC1Q2TB90 917 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 GXYLT1Q4G148 440 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 FLYWCH1Q4VC44 716 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 ANKRD20A2Q5SQ80 823 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 ANKRD20A1Q5TYW2 823 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 FAM91A1Q658Y4 838 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 PAPD4Q6PIY7 484 aaKnown RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 B3GNT6Q6ZMB0 384 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 RINLQ6ZS11 566 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 LANCL3Q6ZV70 420 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SH2D5Q6ZV89 423 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 NUDCD3Q8IVD9 361 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SULF2Q8IWU5 870 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 ARHGAP24Q8N264 748 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 ANKK1Q8NFD2 765 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 OR2A1Q8NGT9 310 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 RAB3IL1Q8TBN0 382 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SKA2Q8WVK7 121 aaPredicted RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 MCUR1Q96AQ8 359 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 C7orf26Q96N11 449 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SECISBP2Q96T21 854 aaKnown RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 NPAS2Q99743 824 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 BTBD10Q9BSF8 475 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 CADM1Q9BY67 442 aaKnown RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 TRIM45Q9H8W5 580 aaPredicted RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 MRPS30Q9NP92 439 aaKnown RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SMYD2Q9NRG4 433 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 BEX4Q9NWD9 120 aaPredicted RBP8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 PLA2G2EQ9NZK7 142 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 B4GALT7Q9UBV7 327 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 PLLPQ9Y342 182 aa8.34□□□□□ -1.07
SYNGAP1-205ENST00000470232 NPIPA2E9PIF3 369 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 NPIPA3F8WFD2 350 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 H0Y3Z8 333 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 SYT5O00445 386 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 BCKDKO14874 412 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 KPNA5O15131 536 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 BIRC5O15392 142 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 GSC2O15499 205 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 CIB2O75838 187 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 METTL18O95568 372 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 C1QAP02745 245 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 IL10P22301 178 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 CNTFP26441 200 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 PSMB5P28074 263 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 UQCRC1P31930 480 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 CCR7P32248 378 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 TRHRP34981 398 aaPredicted RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 PRSS12P56730 875 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 MAT1AQ00266 395 aaKnown RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 MEF2AQ02078 507 aaPredicted RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 RELAQ04206 551 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 BST1Q10588 318 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 STX3Q13277 289 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 DAZAP2Q15038 168 aaPredicted RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 NSDHLQ15738 373 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 SFT2D3Q587I9 215 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 CMPK2Q5EBM0 449 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 STEAP4Q687X5 459 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 TIFABQ6ZNK6 161 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 P3H2Q8IVL5 708 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 MPP5Q8N3R9 675 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 TEX9Q8N6V9 391 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 PLPP5Q8NEB5 264 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 OR51Q1Q8NH59 317 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 SIGLEC10Q96LC7 697 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 SPATA13Q96N96 652 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 TTYH2Q9BSA4 534 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 BDH2Q9BUT1 245 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 DENND2DQ9H6A0 471 aaPredicted RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 FBXO6Q9NRD1 293 aaPredicted RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 CRIM1Q9NZV1 1036 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 SPATA7Q9P0W8 599 aa8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 FN1P02751 2386 aaKnown RBP8.33□□□□□ -1.08
SYNGAP1-205ENST00000470232 OR14I1A6ND48 311 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 ZNF839A8K0R7 811 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 ACOT7O00154 380 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 MAN1A2O60476 641 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 ZNF189O75820 626 aaPredicted RBP8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 GOSR1O95249 250 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 NSA2O95478 260 aaKnown RBP8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 C1orf105O95561 183 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 ENO1P06733 434 aaKnown RBP8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 BPGMP07738 259 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 PSMB4P28070 264 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 TPP2P29144 1249 aaPredicted RBP8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 CRHR1P34998 444 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 PGM1P36871 562 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 MAGEA3P43357 314 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 XCR1P46094 333 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 OR4D2P58180 307 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 MLF1P58340 268 aa8.32□□□□□ -1.08
SYNGAP1-205ENST00000470232 SLC26A5P58743 744 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms