RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CFAP206Q8IYR0 622 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-209ENST00000470026 NEURL3Q96EH8 262 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 MGLLQ99685 303 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 CHCHD6Q9BRQ6 235 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 CXorf36Q9H7Y0 433 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 REV1Q9UBZ9 1251 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 WBP11Q9Y2W2 641 aaKnown RBP13.02□□□□□ -0.33
BRCA1-209ENST00000470026 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.33
BRCA1-209ENST00000470026 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 TBX6O95947 436 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 LINC00271P0C7V0 271 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 POU2F1P14859 743 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 CNR2P34972 360 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 LIM2P55344 173 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 RHAGQ02094 409 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 TEAD2Q15562 447 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 SSX1Q16384 188 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 TRIM60Q495X7 471 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 FAM92BQ6ZTR7 304 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 POC5Q8NA72 575 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 FAM46DQ8NEK8 389 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 Q96MT0 163 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 RSPO3Q9BXY4 272 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF717Q9BY31 904 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ZCCHC2Q9C0B9 1178 aaKnown RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 KLHL25Q9H0H3 589 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 DPEP2Q9H4A9 486 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 CCDC177Q9NQR7 707 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 SAGE1Q9NXZ1 904 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 TAS2R16Q9NYV7 291 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 CFL2Q9Y281 166 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ITM2BQ9Y287 266 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 LSM2Q9Y333 95 aaKnown RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 NUP210Q8TEM1 1887 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 CCRL2O00421 344 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 MED26O95402 600 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 PAPLNO95428 1278 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 FGF19O95750 216 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ADH1AP07327 375 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ILKQ13418 452 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 KRR1Q13601 381 aaKnown RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 GANABQ14697 944 aaKnown RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 STARD3Q14849 445 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 RNLSQ5VYX0 342 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 LCTLQ6UWM7 567 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF547Q8IVP9 402 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 NATD1Q8N6N6 113 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF740Q8NDX6 193 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 GPR32P1Q8NGA4 272 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 OTUB2Q96DC9 234 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 CAPNS2Q96L46 248 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 SDHCQ99643 169 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-209ENST00000470026 SPATA7Q9P0W8 599 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 PCDHGB6Q9Y5F9 930 aa13.01□□□□□ -0.33
BRCA1-209ENST00000470026 PNMA8CA0A1B0GUJ8 204 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 PI15O43692 258 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 KIAA0513O60268 411 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SEMA7AO75326 666 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SEMA3DO95025 777 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 MFN2O95140 757 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 EIF2S1P05198 315 aaKnown RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 OSMP13725 252 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SPNP16150 400 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 FRKP42685 505 aaPredicted RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 TPTEP56180 551 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 WDR5P61964 334 aaKnown RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 KCNJ8Q15842 424 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 TSTQ16762 297 aaKnown RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 MEDAGQ5VYS4 303 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SLX4IPQ5VYV7 408 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 C12orf73Q69YU5 71 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 TMIGD1Q6UXZ0 262 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 PTCHD4Q6ZW05 846 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 MMP21Q8N119 569 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 LMNTD1Q8N9Z9 388 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 OPALINQ96PE5 141 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 TRNT1Q96Q11 434 aaKnown RBP13□□□□□ -0.33
BRCA1-209ENST00000470026 FUZQ9BT04 418 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 NLNQ9BYT8 704 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 RACGAP1Q9H0H5 632 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 RHBGQ9H310 441 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SIAEQ9HAT2 523 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 SLAMF7Q9NQ25 335 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
BRCA1-209ENST00000470026 TRBV4-1A0A0J9YWV2 114 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms