RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 WHRNQ9P202 907 aa12.34□□□□□ -0.43
CPSF4-210ENST00000469897 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
CPSF4-210ENST00000469897 PYCARDQ9ULZ3 195 aa12.34□□□□□ -0.43
CPSF4-210ENST00000469897 CREBBPQ92793 2442 aa12.33□□□□□ -0.43
CPSF4-210ENST00000469897 FAM187AA6NFU0 413 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 FAM166BA8MTA8 275 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 G3V3Y1 287 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 SAP18O00422 153 aaKnown RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 EIF3HO15372 352 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 RAD51CO43502 376 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 C1QAP02745 245 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 S100BP04271 92 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 TUBB4AP04350 444 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 PCNAP12004 261 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ATP5A1P25705 553 aaKnown RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 SPRP35270 261 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 SOX3P41225 446 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 KRTAP10-9P60411 292 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 RAB10P61026 200 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 PLGLB1Q02325 96 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 TGM3Q08188 693 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 DLG1Q12959 904 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 RCN2Q14257 317 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ZKSCAN8Q15776 578 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 PAGE2BQ5JRK9 111 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ZNF793Q6ZN11 406 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 MAATS1Q7Z4T9 603 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ISCA2Q86U28 154 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 OR4N5Q8IXE1 308 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 EID3Q8N140 333 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 MARVELD2Q8N4S9 558 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 PPM1NQ8N819 430 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ACOT4Q8N9L9 421 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 MORN4Q8NDC4 146 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 PSD4Q8NDX1 1056 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 SPATA4Q8NEY3 305 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 STAG3L4Q8TBR4 150 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 DAZLQ92904 295 aaKnown RBP12.33□□□□□ -0.44
CPSF4-210ENST00000469897 KCNC2Q96PR1 638 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 RASL10BQ96S79 203 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 SPOCK3Q9BQ16 436 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 OR8D2Q9GZM6 311 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 ALG9Q9H6U8 611 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 GRHL1Q9NZI5 618 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 SCN3AQ9NY46 2000 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 HEATR5BQ9P2D3 2071 aa12.33□□□□□ -0.44
CPSF4-210ENST00000469897 C17orf105B2RV13 164 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 ZNF354AO60765 605 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-210ENST00000469897 ETHE1O95571 254 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 CNR1P21554 472 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 CASP2P42575 452 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 HK2P52789 917 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 PLTPP55058 493 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 RNF4P78317 190 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 TRADDQ15628 312 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 TBCCQ15814 346 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 AP5B1Q2VPB7 878 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 KBTBD12Q3ZCT8 623 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 GXYLT1Q4G148 440 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 EMC4Q5J8M3 183 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 ARHGAP11AQ6P4F7 1023 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 CHSY3Q70JA7 882 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 GPALPP1Q8IXQ4 340 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 RNF175Q8N4F7 328 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 RPRMLQ8N4K4 120 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 PDPRQ8NCN5 879 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 SRFBP1Q8NEF9 429 aaKnown RBP12.32□□□□□ -0.44
CPSF4-210ENST00000469897 OR2M7Q8NG81 312 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-210ENST00000469897 PPWD1Q96BP3 646 aaKnown RBP12.32□□□□□ -0.44
CPSF4-210ENST00000469897 SORBS1Q9BX66 1292 aaKnown RBP12.32□□□□□ -0.44
CPSF4-210ENST00000469897 UCK2Q9BZX2 261 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 ROGDIQ9GZN7 287 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 ENKD1Q9H0I2 346 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 OR51B5Q9H339 312 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 LYRM4Q9HD34 91 aa12.32□□□□□ -0.44
CPSF4-210ENST00000469897 A0A0G2JMM0 328 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 A0A1W2PPB8 328 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 A0A1W2PRS3 328 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 KIR3DP1A8MWS1 328 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 NPIPA2E9PIF3 369 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 NPIPA3F8WFD2 350 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 GSTA2P09210 222 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 SLC35E2BP0CK96 405 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 HIST1H1TP22492 207 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-210ENST00000469897 CPN2P22792 545 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 SSTR2P30874 369 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 C2orf54Q08AI8 447 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 PMPCAQ10713 525 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 SLAMF1Q13291 335 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 SERTAD2Q14140 314 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 TMEM35AQ53FP2 167 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 TMEM211Q6ICI0 200 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 MED27Q6P2C8 311 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms