RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 DEFB110Q30KQ9 67 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 DEFB134Q4QY38 66 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 C18orf63Q68DL7 685 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 ERICH5Q6P6B1 374 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 FAM86B1Q8N7N1 296 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 C19orf47Q8N9M1 422 aaKnown RBP17.19■□□□□ 0.34
SMC4-211ENST00000469858 GAB3Q8WWW8 586 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 ZBED6CLQ96FA7 236 aaPredicted RBP17.19■□□□□ 0.34
SMC4-211ENST00000469858 MAPKAP1Q9BPZ7 522 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 CCDC3Q9BQI4 270 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 CHST8Q9H2A9 424 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 ERVMER34-1Q9H9K5 563 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 FAM60AQ9NP50 221 aa17.19■□□□□ 0.34
SMC4-211ENST00000469858 LYARQ9NX58 379 aaKnown RBP17.19■□□□□ 0.34
SMC4-211ENST00000469858 SLC9B1P1A6NJY1 282 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 RHPN2P1A8MT19 583 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 PGRMC2O15173 223 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 FRKP42685 505 aaPredicted RBP17.18■□□□□ 0.34
SMC4-211ENST00000469858 MVDP53602 400 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 AQP4P55087 323 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 VSX2P58304 361 aaPredicted RBP17.18■□□□□ 0.34
SMC4-211ENST00000469858 ADRM1Q16186 407 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 COX20Q5RI15 118 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 ENPP6Q6UWR7 440 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 FAM92BQ6ZTR7 304 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 ABHD13Q7L211 337 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 C1orf210Q8IVY1 113 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 MAML2Q8IZL2 1156 aaPredicted RBP17.18■□□□□ 0.34
SMC4-211ENST00000469858 ZNF655Q8N720 491 aaPredicted RBP17.18■□□□□ 0.34
SMC4-211ENST00000469858 CSNK1A1LQ8N752 337 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 ZNF570Q96NI8 536 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 MAP3K3Q99759 626 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 NEUROD4Q9HD90 331 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 SLC35C2Q9NQQ7 365 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 GPATCH2Q9NW75 528 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 TAS2R7Q9NYW3 318 aa17.18■□□□□ 0.34
SMC4-211ENST00000469858 PCDH15Q96QU1 1955 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 CACNA1EQ15878 2313 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 RNF103-CHMP3A0A140T963 221 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 FAM149AA5PLN7 773 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 HCRTR1O43613 425 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 PEX1O43933 1283 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ERAL1O75616 437 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 SERPINA1P01009 418 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 C9P02748 559 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 RETP07949 1114 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 SMIM10L1P0DMW3 83 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ETFAP13804 333 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ACADSP16219 412 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 UQCRC2P22695 453 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 FASP25445 335 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ALDH4A1P30038 563 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 BNC1Q01954 994 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 SIM2Q14190 667 aaPredicted RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 FAM98BQ52LJ0 330 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 LRRC23Q53EV4 343 aaPredicted RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 C6orf132Q5T0Z8 1188 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 PDSS2Q86YH6 399 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 SLC25A45Q8N413 288 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 PAPD5Q8NDF8 572 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 ICA1LQ8NDH6 482 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ADCY4Q8NFM4 1077 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 OR52E4Q8NGH9 312 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 OR52N2Q8NGI0 321 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 EME1Q96AY2 570 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 SMIM10Q96HG1 83 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 NAF1Q96HR8 494 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 ELF4Q99607 663 aaPredicted RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 SPATA9Q9BWV2 254 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 NLNQ9BYT8 704 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ROGDIQ9GZN7 287 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 AGPAT4Q9NRZ5 378 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 DCAF13Q9NV06 445 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 MRPS2Q9Y399 296 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 MAP4K5Q9Y4K4 846 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 RNF215Q9Y6U7 377 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 MUC3AQ02505 3323 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ZSCAN9O15535 394 aaPredicted RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 PROM1O43490 865 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 RPSAP08865 295 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 ATP6V1C1P21283 382 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 CDK9P50750 372 aaKnown RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 CHRNB3Q05901 458 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 RNF130Q86XS8 419 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 CATSPER1Q8NEC5 780 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 MAL2Q969L2 176 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 SERINC2Q96SA4 455 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 CHID1Q9BWS9 393 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 UGT2B28Q9BY64 529 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 STARD5Q9NSY2 213 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 ACSS1Q9NUB1 689 aaPredicted RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 LRIT1Q9P2V4 623 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 FAF1Q9UNN5 650 aaPredicted RBP17.17■□□□□ 0.34
SMC4-211ENST00000469858 SCN2AQ99250 2005 aa17.17■□□□□ 0.34
SMC4-211ENST00000469858 KIF1CO43896 1103 aaKnown RBP17.16■□□□□ 0.34
SMC4-211ENST00000469858 PRKD3O94806 890 aa17.16■□□□□ 0.34
SMC4-211ENST00000469858 KRT75O95678 551 aa17.16■□□□□ 0.34
SMC4-211ENST00000469858 FCGR1AP12314 374 aa17.16■□□□□ 0.34
SMC4-211ENST00000469858 ALOX12P18054 663 aa17.16■□□□□ 0.34
SMC4-211ENST00000469858 NTSP30990 170 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms