RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ADH7P40394 386 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 HSPA7P48741 367 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CDKL1Q00532 357 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 DOC2AQ14183 400 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TGFBIQ15582 683 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 PAOXQ6QHF9 649 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 HSDL2Q6YN16 418 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF793Q6ZN11 406 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 DGAT2L6Q6ZPD8 337 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 FRA10AC1Q70Z53 315 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TMEM200AQ86VY9 491 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF595Q8IYB9 648 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TMEM132CQ8N3T6 1108 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 OR2L5Q8NG80 312 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 PPWD1Q96BP3 646 aaKnown RBP11.36□□□□□ -0.59
HDAC3-204ENST00000469207 SMC6Q96SB8 1091 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF559Q9BR84 538 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TTYH2Q9BSA4 534 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TRIM31Q9BZY9 425 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 TUBA8Q9NY65 449 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-204ENST00000469207 VTI1BQ9UEU0 232 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 Q9UFV3 132 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 CORO1CQ9ULV4 474 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-204ENST00000469207 SNX12Q9UMY4 172 aa11.36□□□□□ -0.59
HDAC3-204ENST00000469207 PHF3Q92576 2039 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 WASHC1A8K0Z3 465 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 C17orf105B2RV13 164 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 HRKO00198 91 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 SAP18O00422 153 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 CLGNO14967 610 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 KLK8O60259 260 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 CLEC3AO75596 197 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 NADKO95544 446 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 EPORP19235 508 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 ACVR2AP27037 513 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 DNAJA1P31689 397 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 PIGAP37287 484 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 KCNC1P48547 511 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 HNMTP50135 292 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 IST1P53990 364 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 MTTPP55157 894 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 RNF4P78317 190 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 MGAT5Q09328 741 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 FOXO1Q12778 655 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 ASPHQ12797 758 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 STX4Q12846 297 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 PDIA2Q13087 525 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 MYBPHQ13203 477 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 OR4D1Q15615 310 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 ELAVL1Q15717 326 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 ADPRMQ3LIE5 342 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 TRIM40Q6P9F5 258 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 FAM47EQ6ZV65 393 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 TRILQ7L0X0 811 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 KRT78Q8N1N4 520 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 RNF175Q8N4F7 328 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 FBXO36Q8NEA4 188 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 SLC2A12Q8TD20 617 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 ANKRD9Q96BM1 317 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 SERINC2Q96SA4 455 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 SORBS1Q9BX66 1292 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 NT5DC2Q9H857 520 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 TRMT1Q9NXH9 659 aaKnown RBP11.35□□□□□ -0.59
HDAC3-204ENST00000469207 MOCS1Q9NZB8 636 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 NF1P21359 2839 aa11.35□□□□□ -0.59
HDAC3-204ENST00000469207 CXorf49A8MYA2 514 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-204ENST00000469207 ACOT7O00154 380 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 PHGDHO43175 533 aaKnown RBP11.34□□□□□ -0.59
HDAC3-204ENST00000469207 WISP3O95389 354 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-204ENST00000469207 RFPL3SP0C7P2 107 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 ZFP36L2P47974 494 aaKnown RBP11.34□□□□□ -0.59
HDAC3-204ENST00000469207 MORF4L2Q15014 288 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 CES4AQ5XG92 561 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 ACAD11Q709F0 780 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 SLC22A16Q86VW1 577 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 SNX31Q8N9S9 440 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 MORN4Q8NDC4 146 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 TTLQ8NG68 377 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 ZNF721Q8TF20 911 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 ANKRD7Q92527 254 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 DAZLQ92904 295 aaKnown RBP11.34□□□□□ -0.59
HDAC3-204ENST00000469207 SLCO2A1Q92959 643 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 VPS39Q96JC1 886 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 FAM173AQ9BQD7 235 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 MCMBPQ9BTE3 642 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 DNAJC11Q9NVH1 559 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 WWOXQ9NZC7 414 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 SPRR3Q9UBC9 169 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 ACAD8Q9UKU7 415 aa11.34□□□□□ -0.59
HDAC3-204ENST00000469207 MRPS33Q9Y291 106 aaKnown RBP11.34□□□□□ -0.59
HDAC3-204ENST00000469207 A0A1B0GVC2 190 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 FOXO6A8MYZ6 492 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 KDM4EB2RXH2 506 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-204ENST00000469207 PRKRAO75569 313 aaKnown RBP11.33□□□□□ -0.6
HDAC3-204ENST00000469207 LRATO95237 230 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 TGFB1P01137 390 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 IGHG3P01860 377 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms