RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PSMA8Q8TAA3 256 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 BAHD1Q8TBE0 780 aaPredicted RBP8.87□□□□□ -0.99
SMC1A-205ENST00000469129 PNPT1Q8TCS8 783 aaKnown RBP8.87□□□□□ -0.99
SMC1A-205ENST00000469129 NETO1Q8TDF5 533 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 LMX1AQ8TE12 382 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 PATE1Q8WXA2 126 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 EDAQ92838 391 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 EXOSC8Q96B26 276 aaKnown RBP8.87□□□□□ -0.99
SMC1A-205ENST00000469129 NEURL3Q96EH8 262 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 PYURFQ96I23 114 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 BBS4Q96RK4 519 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 SERINC2Q96SA4 455 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 LRFN3Q9BTN0 628 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 MIR1-1HGQ9H1L0 117 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 COQ10BQ9H8M1 238 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 PRDM7Q9NQW5 492 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 SEMA3GQ9NS98 782 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 HRASLS2Q9NWW9 162 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 TEX10Q9NXF1 929 aaPredicted RBP8.87□□□□□ -0.99
SMC1A-205ENST00000469129 MS4A12Q9NXJ0 267 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 SCOCQ9UIL1 159 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 UTS2RQ9UKP6 389 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 POMT2Q9UKY4 750 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 BAG5Q9UL15 447 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 PSME2Q9UL46 239 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 SIT1Q9Y3P8 196 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 ZNF451Q9Y4E5 1061 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 NUP210LQ5VU65 1888 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 CCDC88CQ9P219 2028 aa8.87□□□□□ -0.99
SMC1A-205ENST00000469129 ADAMTS20P59510 1910 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 A0A0G2JN53 185 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 A0A0J9YVX5 310 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 FAM149AA5PLN7 773 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 PRR33A8MZF0 331 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 GNGT2O14610 69 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 AQP9O43315 295 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 B3GALT2O43825 422 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SH3BP5O60239 455 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 NOBOXO60393 691 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 TNFRSF21O75509 655 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 PDE9AO76083 593 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 AIFM1O95831 613 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CST1P01037 141 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 NTRK1P04629 796 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 FABP3P05413 133 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CELA2BP08218 269 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 ZNF888P0CJ79 500 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 ARAFP10398 606 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CERS1P27544 350 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 TLX1P31314 330 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 KDELR2P33947 212 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 GPC1P35052 558 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 MAGEA2P43356 314 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CAPZBP47756 277 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 PXNP49023 591 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 KHKP50053 298 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 AFF3P51826 1226 aaKnown RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 GTF2A1P52655 376 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 EPHA4P54764 986 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 DSTNP60981 165 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 TNFRSF17Q02223 184 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SIGLEC14Q08ET2 396 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SLAMF1Q13291 335 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 C1orf61Q13536 156 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 BLMHQ13867 455 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SCARB2Q14108 478 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SPIDRQ14159 915 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 MYBPC3Q14896 1274 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 MPEG1Q2M385 716 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 ZC3H12BQ5HYM0 836 aaKnown RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SAXO2Q658L1 398 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 OR52E8Q6IFG1 317 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 NIPAL1Q6NVV3 410 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 MAMSTRQ6ZN01 415 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CBLL1Q75N03 491 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 PATL1Q86TB9 770 aaKnown RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 RNF130Q86XS8 419 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 EPHX4Q8IUS5 362 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 APLFQ8IW19 511 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 C10orf111Q8N326 155 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CBR4Q8N4T8 237 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 METTL25Q8N6Q8 603 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 OR56A1Q8NGH5 318 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 DNASE2BQ8WZ79 361 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 LZICQ8WZA0 190 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 N4BP2L2Q92802 583 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 TBC1D20Q96BZ9 403 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 TM4SF19Q96DZ7 209 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SLC35G5Q96KT7 338 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 RDH12Q96NR8 316 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 OR2A5Q96R48 311 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CCDC3Q9BQI4 270 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 OSBPL10Q9BXB5 764 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 AICDAQ9GZX7 198 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 DUSP15Q9H1R2 295 aaPredicted RBP8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SEMA6CQ9H3T2 930 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 KLHL31Q9H511 634 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 CXorf36Q9H7Y0 433 aa8.86□□□□□ -0.99
SMC1A-205ENST00000469129 SLC35C2Q9NQQ7 365 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms