RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 GID8Q9NWU2 228 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 FAM120CQ9NX05 1096 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 OCIAD1Q9NX40 245 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TOR4AQ9NXH8 423 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 SIDT1Q9NXL6 827 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TAS2R7Q9NYW3 318 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CROTQ9UKG9 612 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CES1P1Q9UKY3 287 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TMEM184BQ9Y519 407 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 EP300Q09472 2414 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 C1orf226A1L170 272 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 ZNF749O43361 778 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 HYAL3O43820 417 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CPN2P22792 545 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CDKN2CP42773 168 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 ITGA1P56199 1179 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PSME3P61289 254 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 ACY1Q03154 408 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 FOXM1Q08050 763 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TRA2AQ13595 282 aaKnown RBP eCLIP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 C6orf10Q5SRN2 563 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TLDC1Q6P9B6 456 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TTLL10Q6ZVT0 673 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 ASCL5Q7RTU5 278 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CA13Q8N1Q1 262 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TTC29Q8NA56 475 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 DNAJB14Q8TBM8 379 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 EXOSC8Q96B26 276 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CLPTM1LQ96KA5 538 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CDRT15Q96T59 188 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 CSF3RQ99062 836 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 NPLQ9BXD5 320 aaPredicted RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 TRIM8Q9BZR9 551 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PAIP1Q9H074 479 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 RMND5AQ9H871 391 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 LYRM4Q9HD34 91 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 VAPAQ9P0L0 249 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 DHCR7Q9UBM7 475 aaKnown RBP12.13□□□□□ -0.47
RUNX1-213ENST00000469087 PACSIN3Q9UKS6 424 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
RUNX1-213ENST00000469087 MUC6Q6W4X9 2439 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 FAM227AF5H4B4 570 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 RNASET2O00584 256 aaKnown RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 CYR61O00622 381 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 CHST10O43529 356 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 KCNH1O95259 989 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NSA2O95478 260 aaKnown RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NPPAP01160 153 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 ALAS2P22557 587 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 SLC6A2P23975 617 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 PTPN6P29350 595 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 PGM1P36871 562 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 INSM1Q01101 510 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 TRIP6Q15654 476 aaKnown RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 GTDC1Q4AE62 458 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NANOGP8Q6NSW7 305 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 SLC48A1Q6P1K1 146 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 DHDDSQ86SQ9 333 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 KIAA2013Q8IYS2 634 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 METTL27Q8N6F8 245 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 VPS37AQ8NEZ2 397 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 MMABQ96EY8 250 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 ITCHQ96J02 903 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 HOPXQ9BPY8 73 aaPredicted RBP12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NANOGQ9H9S0 305 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 FANCEQ9HB96 536 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 SLAMF7Q9NQ25 335 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 MS4A12Q9NXJ0 267 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NDE1Q9NXR1 346 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 SLC25A37Q9NYZ2 338 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 EHD3Q9NZN3 535 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 PHF11Q9UIL8 331 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 UTS2RQ9UKP6 389 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 NEUROG3Q9Y4Z2 214 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
RUNX1-213ENST00000469087 RFXANKO14593 260 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 RFPL3O75679 317 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 CPSF4O95639 269 aaKnown RBP12.11□□□□□ -0.47
RUNX1-213ENST00000469087 GSNP06396 782 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
RUNX1-213ENST00000469087 BUD31P41223 144 aaPredicted RBP12.11□□□□□ -0.47
RUNX1-213ENST00000469087 CLDN6P56747 220 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 PCBP4P57723 403 aaKnown RBP12.11□□□□□ -0.47
RUNX1-213ENST00000469087 SIM1P81133 766 aaPredicted RBP12.11□□□□□ -0.47
RUNX1-213ENST00000469087 MAT1AQ00266 395 aaKnown RBP12.11□□□□□ -0.47
RUNX1-213ENST00000469087 E2F1Q01094 437 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 TNFRSF17Q02223 184 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 ILKQ13418 452 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 SYT16Q17RD7 645 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 ZNF750Q32MQ0 723 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 LRIF1Q5T3J3 769 aa12.11□□□□□ -0.47
RUNX1-213ENST00000469087 ANXA8L1Q5VT79 327 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms