RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MLIPQ5VWP3 458 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF773Q6PK81 442 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ERI1Q8IV48 349 aaKnown RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 DIRAS2Q96HU8 199 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 C1QTNF1Q9BXJ1 281 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ACPTQ9BZG2 426 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 NLGN3Q9NZ94 848 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PRODH2Q9UF12 536 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ERVK-11Q9UQG0 969 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ACVR2AP27037 513 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 CSTF2P33240 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PHF19Q5T6S3 580 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 EGFLAMQ63HQ2 1017 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 FIGLAQ6QHK4 219 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM125Q96AQ2 219 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PIP5K1AQ99755 562 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 TBC1D17Q9HA65 648 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PAK6Q9NQU5 681 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PCDHGB1Q9Y5G3 927 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 F5P12259 2224 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 C17orf113A0A1B0GUU1 675 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 HMX2A2RU54 273 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 E2F3O00716 465 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ABCB7O75027 752 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PRKAR1AP10644 381 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 BMP2P12643 396 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ETFAP13804 333 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 IER5LQ5T953 404 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 RPTNQ6XPR3 784 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF433Q8N7K0 673 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 Q8N9G6 341 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 OR6K6Q8NGW6 343 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 WFDC5Q8TCV5 224 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF480Q8WV37 535 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 TSSK6Q9BXA6 273 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 GIN1Q9NXP7 522 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 IL37Q9NZH6 218 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM5Q9Y2B1 443 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 TLX3O43711 291 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 RETP07949 1114 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF3P17036 446 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 OMPP47874 163 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PTPRRQ15256 657 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 UAP1L1Q3KQV9 507 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 KLHL24Q6TFL4 600 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 USP43Q70EL4 1123 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 RASGRP3Q8IV61 690 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 LSMEM2Q8N112 164 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 EPYCQ99645 322 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PRRG4Q9BZD6 226 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 SLC35C2Q9NQQ7 365 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 C14orf105Q9NVL8 296 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 SUSD2Q9UGT4 822 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 CA14Q9ULX7 337 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 SPIN1Q9Y657 262 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 GPR37L1O60883 481 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 CTGFP29279 349 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PDHA2P29803 388 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 HHEXQ03014 270 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 CCDC92Q53HC0 331 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TCEAL5Q5H9L2 206 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TANGO2Q6ICL3 276 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 SUN3Q8TAQ9 357 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 GTPBP2Q9BX10 602 aaKnown RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 ENTPD2Q9Y5L3 495 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 FAM221BA6H8Z2 402 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 H3BSA7 217 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 SOX14O95416 240 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 MXD1Q05195 221 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PLA2G15Q8NCC3 412 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 VN1R2Q8NFZ6 395 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 RPLP0P6Q8NHW5 317 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 FAM129BQ96TA1 746 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 NELL2Q99435 816 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 OR51I1Q9H343 314 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 DMRT3Q9NQL9 472 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM9Q9P0T7 183 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 ACSL6Q9UKU0 697 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 SBF2Q86WG5 1849 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 OR52A4PA6NMU1 304 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PRAMEF26H0Y7S4 382 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 C1orf105O95561 183 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 RENP00797 406 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 GSTM2P28161 218 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 NUP62P37198 522 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 IL12RB1P42701 662 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 MAGEA12P43365 314 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms