RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 NR4A3Q92570 626 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 RGMAQ96B86 450 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 REPS1Q96D71 796 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 PHF21BQ96EK2 531 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 MTERF1Q99551 399 aaKnown RBP18.15■□□□□ 0.5
GMDS-203ENST00000467288 MRPL57Q9BQC6 102 aaKnown RBP18.15■□□□□ 0.5
GMDS-203ENST00000467288 MRPL46Q9H2W6 279 aaKnown RBP18.15■□□□□ 0.5
GMDS-203ENST00000467288 PRM3Q9NNZ6 103 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 ADAP2Q9NPF8 381 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 PSD3Q9NYI0 1048 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 RNF11Q9Y3C5 154 aa18.15■□□□□ 0.5
GMDS-203ENST00000467288 SAP18O00422 153 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 SMIM24O75264 130 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 DDAH2O95865 285 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 SBK3P0C264 359 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 PTX3P26022 381 aaPredicted RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 TPP2P29144 1249 aaPredicted RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 ST13P50502 369 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 CLCN2P51788 898 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 RPS13P62277 151 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 OR1C1Q15619 314 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 ELAVL1Q15717 326 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 CPSF6Q16630 551 aaKnown RBP eCLIP18.14■□□□□ 0.49
GMDS-203ENST00000467288 OR4C11Q6IEV9 310 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 CLNKQ7Z7G1 428 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 ZCCHC7Q8N3Z6 543 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 EIF1ADQ8N9N8 165 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 DNAJB8Q8NHS0 232 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 MTBPQ96DY7 904 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 VMP1Q96GC9 406 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 SCMH1Q96GD3 660 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 NTMT1Q9BV86 223 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 SORBS1Q9BX66 1292 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 DEFB126Q9BYW3 111 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 EPB41L4BQ9H329 900 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 NOL11Q9H8H0 719 aaKnown RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 L2HGDHQ9H9P8 463 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 ZBTB26Q9HCK0 441 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 ANKRD10Q9NXR5 420 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 FETUBQ9UGM5 382 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 ERRFI1Q9UJM3 462 aaPredicted RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 ZNF223Q9UK11 482 aaPredicted RBP18.14■□□□□ 0.49
GMDS-203ENST00000467288 PCTPQ9UKL6 214 aa18.14■□□□□ 0.49
GMDS-203ENST00000467288 ITPR2Q14571 2701 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 PLPP1O14494 284 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 NEURL1O76050 574 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 CLDN9O95484 217 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 CRYABP02511 175 aaKnown RBP18.13■□□□□ 0.49
GMDS-203ENST00000467288 RAP1GDS1P52306 607 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 PHEXP78562 749 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 CUL3Q13618 768 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 SERTAD2Q14140 314 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 SLC29A2Q14542 456 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 ZRSR2Q15696 482 aaKnown RBP18.13■□□□□ 0.49
GMDS-203ENST00000467288 ZNF468Q5VIY5 522 aaPredicted RBP18.13■□□□□ 0.49
GMDS-203ENST00000467288 SPINK14Q6IE38 97 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 TMEM132CQ8N3T6 1108 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 OR52B6Q8NGF0 335 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 CENPKQ9BS16 269 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 ZNF717Q9BY31 904 aaPredicted RBP18.13■□□□□ 0.49
GMDS-203ENST00000467288 ALOXE3Q9BYJ1 711 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 TRIM45Q9H8W5 580 aaPredicted RBP18.13■□□□□ 0.49
GMDS-203ENST00000467288 VTI1BQ9UEU0 232 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 PPT2Q9UMR5 302 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 SPACA6W5XKT8 324 aa18.13■□□□□ 0.49
GMDS-203ENST00000467288 TRBV11-1A0A0K0K1C0 115 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 WIPF3A6NGB9 483 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 FOXE1O00358 373 aaPredicted RBP18.12■□□□□ 0.49
GMDS-203ENST00000467288 RPS17P08708 135 aaKnown RBP18.12■□□□□ 0.49
GMDS-203ENST00000467288 CD46P15529 392 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 CPN2P22792 545 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 TRHRP34981 398 aaPredicted RBP18.12■□□□□ 0.49
GMDS-203ENST00000467288 OC90Q02509 493 aaPredicted RBP18.12■□□□□ 0.49
GMDS-203ENST00000467288 TRAF3Q13114 568 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 SLAMF1Q13291 335 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 HORMAD2Q8N7B1 307 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 NCLNQ969V3 563 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 ATP6V1E2Q96A05 226 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 ANKRD9Q96BM1 317 aaPredicted RBP18.12■□□□□ 0.49
GMDS-203ENST00000467288 NSUN5Q96P11 429 aaKnown RBP18.12■□□□□ 0.49
GMDS-203ENST00000467288 CDK15Q96Q40 435 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 C1QTNF3Q9BXJ4 246 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 HES7Q9BYE0 225 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 MS4A12Q9NXJ0 267 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 LRFN1Q9P244 771 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 FBXW2Q9UKT8 454 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 SLC5A6Q9Y289 635 aa18.12■□□□□ 0.49
GMDS-203ENST00000467288 DOPEY1Q5JWR5 2465 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 LDB3O75112 727 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 ETHE1O95571 254 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 MST1P26927 711 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 COL8A1P27658 744 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 BSGP35613 385 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 NEK2P51955 445 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 CCNG1P51959 295 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 IGLV3-21P80748 117 aaPredicted RBP18.11■□□□□ 0.49
GMDS-203ENST00000467288 STX4Q12846 297 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 MRM1Q6IN84 353 aaKnown RBP18.11■□□□□ 0.49
GMDS-203ENST00000467288 SLC25A25Q6KCM7 469 aa18.11■□□□□ 0.49
GMDS-203ENST00000467288 GPR180Q86V85 440 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms