RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 SPATA13Q96N96 652 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 GPR78Q96P69 363 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 QKIQ96PU8 341 aaKnown RBP eCLIP3.31□□□□□ -1.88
SORT1-202ENST00000466471 SIGLEC11Q96RL6 698 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 GPR22Q99680 433 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 RBBP8Q99708 897 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SH3GL1Q99961 368 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 GON7Q9BXV9 100 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 TRIM15Q9C019 465 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 CLPBQ9H078 707 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 RAD21L1Q9H4I0 556 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 DUSP21Q9H596 190 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 ATP13A3Q9H7F0 1226 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 POLR1BQ9H9Y6 1135 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 CYP3A43Q9HB55 503 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 TRPV4Q9HBA0 871 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 IL21RQ9HBE5 538 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 NMRAL1Q9HBL8 299 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 WDR6Q9NNW5 1121 aaKnown RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 SEMA4BQ9NPR2 832 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 HPS4Q9NQG7 708 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 XPNPEP1Q9NQW7 623 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SMOXQ9NWM0 555 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SMPD3Q9NY59 655 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 PKD2L2Q9NZM6 624 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 NTMQ9P121 344 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 HECAQ9UBI9 543 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 MTRRQ9UBK8 725 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 MARCOQ9UEW3 520 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 RIMKLBQ9ULI2 386 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 STAP1Q9ULZ2 295 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 ERVW-1Q9UQF0 538 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 CAMK2AQ9UQM7 478 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 CDYLQ9Y232 598 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 TRAPPC4Q9Y296 219 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 SLC27A6Q9Y2P4 619 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 WBP11Q9Y2W2 641 aaKnown RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 NDUFAF1Q9Y375 327 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 TSC22D4Q9Y3Q8 395 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 HEMK1Q9Y5R4 338 aaPredicted RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 SNX5Q9Y5X3 404 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 COPG1Q9Y678 874 aaKnown RBP3.31□□□□□ -1.88
SORT1-202ENST00000466471 PMF1-BGLAPU3KQ54 211 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 KAT6AQ92794 2004 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 MYH6P13533 1939 aa3.31□□□□□ -1.88
SORT1-202ENST00000466471 RTTNQ86VV8 2226 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 IGKV6D-21A0A0A0MT36 114 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 LOC105371267A0A1B0GV96 52 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 A0A1W2PRX2 142 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 OR5K3A6NET4 321 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GLOD5A6NK44 160 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CLDN24A6NM45 220 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 A8MZ25 164 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 E9PAM4 449 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GOLGA8SH3BPF8 625 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 UBXN8O00124 270 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SCAMP1O15126 338 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 BET1O15155 118 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SLC16A4O15374 487 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TRIAP1O43715 76 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TOM1L1O75674 476 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 RFPL2O75678 378 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 STAM2O75886 525 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TPPPO94811 219 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 C2P06681 752 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ABCB1P08183 1280 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 TFPTP0C1Z6 253 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PRR35P0CG20 571 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZNF888P0CJ79 500 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 TMEM225BP0DP42 221 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CD1EP15812 388 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 EPCAMP16422 314 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZNF8P17098 575 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 IGFBP2P18065 325 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NCF2P19878 526 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 CHRM3P20309 590 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SAT1P21673 171 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CXCR2P25025 360 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PSMA2P25787 234 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 HTR1EP28566 365 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TYK2P29597 1187 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CD6P30203 668 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 POLR2IP36954 125 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 DDOSTP39656 456 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 THPOP40225 353 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 OPRL1P41146 370 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GRIA3P42263 894 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PTPN9P43378 593 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NAMPTP43490 491 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 RPS5P46782 204 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 CXCL12P48061 93 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NPY2RP49146 381 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ALDH7A1P49419 539 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PLA2G16P53816 162 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CDH13P55290 713 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 EEFSECP57772 596 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 STX1BP61266 288 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CSNK2BP67870 215 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms