RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 SERPINB4P48594 390 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 KRT6CP48668 564 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ACTN3Q08043 901 aaPredicted RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 GALNT1Q10472 559 aaPredicted RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 TBL3Q12788 808 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 AIMP2Q13155 320 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 ARL13AQ5H913 290 aaPredicted RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 PAPD4Q6PIY7 484 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 CYP20A1Q6UW02 462 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 QSOX2Q6ZRP7 698 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ASB18Q6ZVZ8 466 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 CROCCP2Q86T23 111 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 GPR180Q86V85 440 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 NUDT13Q86X67 352 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 NUDCD3Q8IVD9 361 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 SCUBE1Q8IWY4 988 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 MMP21Q8N119 569 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 METTL4Q8N3J2 472 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 C1orf52Q8N6N3 182 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 SIRT6Q8N6T7 355 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 MGARPQ8TDB4 240 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 SREK1Q8WXA9 508 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 APIPQ96GX9 242 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 IMMP1LQ96LU5 166 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ADNPQ9H2P0 1102 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ZNF552Q9H707 407 aaPredicted RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 DDX31Q9H8H2 851 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 LYRM4Q9HD34 91 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 SSU72Q9NP77 194 aaKnown RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 C19orf25Q9UFG5 118 aaPredicted RBP10.94□□□□□ -0.66
CUX1-207ENST00000465461 STK38LQ9Y2H1 464 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 ASB4Q9Y574 426 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 CACNA1GO43497 2377 aa10.94□□□□□ -0.66
CUX1-207ENST00000465461 NBEAQ8NFP9 2946 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 ZFYVE26Q68DK2 2539 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 TCRBV16S1A1N1A0A5B0 115 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 EIF4E1BA6NMX2 242 aaKnown RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 CLDN4O14493 209 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 PROM1O43490 865 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 ITM2AO43736 263 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 FGF17O60258 216 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 PRR35P0CG20 571 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 CD97P48960 835 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 PGDP52209 483 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 MYBPC3Q14896 1274 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 CHI3L2Q15782 390 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 BTBD16Q32M84 506 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 LACTB2Q53H82 288 aaPredicted RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 CCNYL2Q5T2Q4 361 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 B3GNTL1Q67FW5 361 aaPredicted RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 FCRLBQ6BAA4 426 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 MRM1Q6IN84 353 aaKnown RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 LINC00696Q6ZRV3 163 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 COMMD6Q7Z4G1 85 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 KBTBD2Q8IY47 623 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 ZNF595Q8IYB9 648 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 ZCCHC7Q8N3Z6 543 aaKnown RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 ZNF843Q8N446 348 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 KIF2BQ8N4N8 673 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 BRIX1Q8TDN6 353 aaKnown RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 CHTF18Q8WVB6 975 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 ANKRD9Q96BM1 317 aaPredicted RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 TLCD1Q96CP7 247 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 EBPLQ9BY08 206 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 BRF2Q9HAW0 419 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 RIC8BQ9NVN3 520 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 TEX10Q9NXF1 929 aaPredicted RBP10.93□□□□□ -0.66
CUX1-207ENST00000465461 PTGFRNQ9P2B2 879 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 VPS29Q9UBQ0 182 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 PPT2Q9UMR5 302 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 ACTL7BQ9Y614 415 aa10.93□□□□□ -0.66
CUX1-207ENST00000465461 DOCK10Q96BY6 2186 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 A0A1W2PQ72 361 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 A0A1W2PS29 197 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 TMEM120BA0PK00 339 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 GOLGA6L10A6NI86 522 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 A8MUI8 341 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 AZIN1O14977 448 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 PGRMC2O15173 223 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 TM9SF1O15321 606 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 NPHS1O60500 1241 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 CTNSO60931 367 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 MYO1DO94832 1006 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 SEMA3DO95025 777 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 AIFM1O95831 613 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 F10P00742 488 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 IFNA16P05015 189 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 DHRS4L1P0CG22 281 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 UROSP10746 265 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 BGNP21810 368 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 TSFMP43897 325 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 HSD17B7P56937 341 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 RAE1P78406 368 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 TNFRSF17Q02223 184 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 ASPHQ12797 758 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 CSTF3Q12996 717 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 RCN2Q14257 317 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 NADK2Q4G0N4 442 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms