RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SLC44A2Q8IWA5 706 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 DCUN1D3Q8IWE4 304 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 CELF5Q8N6W0 485 aaKnown RBP17.47■□□□□ 0.39
SYNE4-204ENST00000465425 TMIEQ8NEW7 156 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 B3GNT7Q8NFL0 401 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 POF1BQ8WVV4 589 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 NXPE3Q969Y0 559 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 CRELD1Q96HD1 420 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 PSD2Q9BQI7 771 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 PRDM8Q9NQV8 689 aa17.47■□□□□ 0.39
SYNE4-204ENST00000465425 PLPP1O14494 284 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 EPCAMP16422 314 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 CBLP22681 906 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 POU1F1P28069 291 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 RPS26P62854 115 aaKnown RBP17.46■□□□□ 0.39
SYNE4-204ENST00000465425 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 COLEC12Q5KU26 742 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 FAM83HQ6ZRV2 1179 aaPredicted RBP17.46■□□□□ 0.39
SYNE4-204ENST00000465425 PTCHD4Q6ZW05 846 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 FAM129CQ86XR2 697 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 ITPKCQ96DU7 683 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 RAD9AQ99638 391 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 OR52A5Q9H2C5 316 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 NMNAT1Q9HAN9 279 aaPredicted RBP17.46■□□□□ 0.39
SYNE4-204ENST00000465425 TAC3Q9UHF0 121 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 SLC27A6Q9Y2P4 619 aa17.46■□□□□ 0.39
SYNE4-204ENST00000465425 MRPS23Q9Y3D9 190 aaKnown RBP17.46■□□□□ 0.39
SYNE4-204ENST00000465425 EDDM13A0A1B0GTR0 161 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 ARRDC5A6NEK1 342 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 EFCAB10A6NFE3 127 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 METTL15A6NJ78 407 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 PRRT4C9JH25 899 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 GASTP01350 101 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 S100A5P33763 92 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 RGS6P49758 472 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 ELAVL3Q14576 367 aaKnown RBP17.46■□□□□ 0.38
SYNE4-204ENST00000465425 HEPACAMQ14CZ8 416 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 HNRNPA1L2Q32P51 320 aaKnown RBP17.46■□□□□ 0.38
SYNE4-204ENST00000465425 RPS26P11Q5JNZ5 115 aaPredicted RBP17.46■□□□□ 0.38
SYNE4-204ENST00000465425 C9orf64Q5T6V5 341 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 KHDRBS2Q5VWX1 349 aaKnown RBP17.46■□□□□ 0.38
SYNE4-204ENST00000465425 KLHL17Q6TDP4 642 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 PDZD3Q86UT5 571 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 C9orf43Q8TAL5 461 aaPredicted RBP17.46■□□□□ 0.38
SYNE4-204ENST00000465425 TFGQ92734 400 aaPredicted RBP17.46■□□□□ 0.38
SYNE4-204ENST00000465425 PDXPQ96GD0 296 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 LRRC3BQ96PB8 259 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 NEUROD4Q9HD90 331 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 CLN6Q9NWW5 311 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF229Q9UJW7 825 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 TMEM98Q9Y2Y6 226 aa17.46■□□□□ 0.38
SYNE4-204ENST00000465425 SH3D21A4FU49 640 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 RTCAO00442 366 aaKnown RBP17.45■□□□□ 0.38
SYNE4-204ENST00000465425 PDPK1O15530 556 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 HOXC11O43248 304 aaPredicted RBP17.45■□□□□ 0.38
SYNE4-204ENST00000465425 ATP6V1G1O75348 118 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 RB1P06400 928 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 CHMP24386 653 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 CXCR2P25025 360 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 CRISP1P54107 249 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 MESP2Q0VG99 397 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 SPDYE7PQ495Y7 208 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 SLC22A16Q86VW1 577 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 AMZ2Q86W34 360 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 OR5P2Q8WZ92 322 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 NEURL3Q96EH8 262 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 AIF1LQ9BQI0 150 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 ROGDIQ9GZN7 287 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 OR51E2Q9H255 320 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 ABCB10Q9NRK6 738 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 TMCC3Q9ULS5 477 aa17.45■□□□□ 0.38
SYNE4-204ENST00000465425 MTCL1Q9Y4B5 1905 aaKnown RBP17.45■□□□□ 0.38
SYNE4-204ENST00000465425 ADAM23O75077 832 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 HNRNPA1P09651 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
SYNE4-204ENST00000465425 DDX5P17844 614 aaKnown RBP17.44■□□□□ 0.38
SYNE4-204ENST00000465425 FUT4P22083 530 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 EIF2DP41214 584 aaKnown RBP17.44■□□□□ 0.38
SYNE4-204ENST00000465425 HSPB3Q12988 150 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 MED22Q15528 200 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 DEPDC1Q5TB30 811 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 TUBA3EQ6PEY2 450 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 ZNF367Q7RTV3 350 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 C11orf96Q7Z7L8 435 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 NATD1Q8N6N6 113 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 HORMAD2Q8N7B1 307 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 CXorf40AQ8TE69 158 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 SLC38A5Q8WUX1 472 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 CHCHD6Q9BRQ6 235 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 POLE4Q9NR33 117 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 SLC6A14Q9UN76 642 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 AGAP5A6NIR3 686 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 SAGE2PA6NJ88 616 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 ZAR1LA6NP61 321 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 TAF4O00268 1085 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 SEMA3DO95025 777 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 CNTN1Q12860 1018 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 PUM1Q14671 1186 aaKnown RBP eCLIP17.44■□□□□ 0.38
SYNE4-204ENST00000465425 SAXO2Q658L1 398 aa17.44■□□□□ 0.38
SYNE4-204ENST00000465425 FRMPD2BQ6IN97 320 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms