RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PIPSLA2A3N6 862 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 MGAT4DA6NG13 374 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 OR6C75A6NL08 312 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 C12orf71A8MTZ7 269 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TLR4O00206 839 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 NFKBIEO00221 500 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 QSOX1O00391 747 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 FAAHO00519 579 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RNASET2O00584 256 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CTDSP2O14595 271 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ZNF197O14709 1029 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TEX28O15482 410 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TAPBPO15533 448 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 GPX5O75715 221 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 GADD45GO95257 159 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC25A14O95258 325 aaPredicted RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 WISP1O95388 367 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 PRAMEF1O95521 474 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CPSF4O95639 269 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RAB36O95755 333 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 GUCA1CO95843 209 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 PDYNP01213 254 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 VIPP01282 170 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TRBC1P01850 177 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 IGHA2P01877 340 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4L2P0CJ85 424 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4L3P0CJ86 424 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4L4P0CJ87 422 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4L5P0CJ88 424 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4L6P0CJ89 424 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4L7P0CJ90 424 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 COL6A1P12109 1028 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 OSMP13725 252 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 JUPP14923 745 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 AMD1P17707 334 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CR2P20023 1033 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 MAGP20916 626 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 EPHA1P21709 976 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 PTGS2P35354 604 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TALDO1P37837 337 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RPS19P39019 145 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 NSG1P42857 185 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CAPZA2P47755 286 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TUFMP49411 452 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 MAPK12P53778 367 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SRP54P61011 504 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RRAS2P62070 204 aaPredicted RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CD83Q01151 205 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ALDH6A1Q02252 535 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 COX10Q12887 443 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 PPP1R8Q12972 351 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ADAM15Q13444 863 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 GTDC1Q4AE62 458 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 C10orf120Q5SQS8 335 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 GPRC6AQ5T6X5 926 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ARMC12Q5T9G4 340 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 NXNL2Q5VZ03 156 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ANKRD34AQ69YU3 496 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 FAAH2Q6GMR7 532 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 LAIR1Q6GTX8 287 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SUSD1Q6UWL2 747 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SPATC1Q76KD6 591 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 PTOV1Q86YD1 416 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 NLGN4XQ8N0W4 816 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SLC34A3Q8N130 599 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 GPC2Q8N158 579 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CADM2Q8N3J6 435 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 OR5H6Q8NGV6 325 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 UFD1Q92890 307 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 FBXO32Q969P5 355 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 MTERF3Q96E29 417 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SPATA17Q96L03 361 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 OPALINQ96PE5 141 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TSSK3Q96PN8 268 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CITED4Q96RK1 184 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RTP3Q9BQQ7 232 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TINF2Q9BSI4 451 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SYT17Q9BSW7 474 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 INPP5KQ9BT40 448 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SPON2Q9BUD6 331 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 UCK2Q9BZX2 261 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 POLR2J2Q9GZM3 115 aaKnown RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ROGDIQ9GZN7 287 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RANGRFQ9HD47 186 aaPredicted RBP6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TXNRD2Q9NNW7 524 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 EMC7Q9NPA0 242 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 ZC4H2Q9NQZ6 224 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 RAD18Q9NS91 495 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 SNTG1Q9NSN8 517 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 TMEM30AQ9NV96 361 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 NDUFAF4Q9P032 175 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 IL17CQ9P0M4 197 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 VPS29Q9UBQ0 182 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 FAM8A1Q9UBU6 413 aa6.88□□□□□ -1.31
CLSTN1-204ENST00000464286 DUX4Q9UBX2 424 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms