RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 GPS1Q13098 491 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 ELAVL1Q15717 326 aaKnown RBP12.3□□□□□ -0.44
MRPL55-224ENST00000464148 HSP90AA5PQ58FG0 334 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 OPN5Q6U736 354 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 CHSY3Q70JA7 882 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 CLNKQ7Z7G1 428 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 FAM47BQ8NA70 645 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 GOLM1Q8NBJ4 401 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 RNASE6Q93091 150 aaKnown RBP12.3□□□□□ -0.44
MRPL55-224ENST00000464148 SMIM10Q96HG1 83 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 SCYL1Q96KG9 808 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 NEUROD4Q9HD90 331 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 IARS2Q9NSE4 1012 aaKnown RBP12.3□□□□□ -0.44
MRPL55-224ENST00000464148 TUBA8Q9NY65 449 aaPredicted RBP12.3□□□□□ -0.44
MRPL55-224ENST00000464148 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
MRPL55-224ENST00000464148 MRPS33Q9Y291 106 aaKnown RBP12.3□□□□□ -0.44
MRPL55-224ENST00000464148 GOLGA8MH3BSY2 632 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 TGFBR3LH3BV60 316 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 HCN1O60741 890 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 HOXC12P31275 282 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 HNRNPFP52597 415 aaKnown RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 IL2P60568 153 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 STXBP1P61764 594 aaKnown RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 FOXO1Q12778 655 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 RUNX2Q13950 521 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 DAZAP2Q15038 168 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 HYAL4Q2M3T9 481 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 BBS9Q3SYG4 887 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 ANKRD22Q5VYY1 191 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 TMPRSS11BQ86T26 416 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 ZNF595Q8IYB9 648 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 FBXW8Q8N3Y1 598 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 GPATCH11Q8N954 259 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 RELL2Q8NC24 303 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 TMEM52Q8NDY8 209 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 NUDT8Q8WV74 236 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 MAIP1Q8WWC4 291 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 DAZLQ92904 295 aaKnown RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 FBXL8Q96CD0 374 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 SGCZQ96LD1 299 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 SH3GL2Q99962 352 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 FAM167BQ9BTA0 163 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 NPLQ9BXD5 320 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 OR8D2Q9GZM6 311 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 ZNF395Q9H8N7 513 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 PELI2Q9HAT8 420 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 XAB2Q9HCS7 855 aaKnown RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 SEMA4BQ9NPR2 832 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 SPRR3Q9UBC9 169 aa12.29□□□□□ -0.44
MRPL55-224ENST00000464148 MTRF1LQ9UGC7 380 aaKnown RBP12.29□□□□□ -0.44
MRPL55-224ENST00000464148 A0A088AWK7 358 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 MYOCOSA0A1B0GUC4 107 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 SYNDIG1LA6NDD5 238 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 TUBAL3A6NHL2 446 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 FAM171A2A8MVW0 826 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 ERI3O43414 337 aaKnown RBP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 B3GALT2O43825 422 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 FGGP02679 453 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 HEXAP06865 529 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 CCL3P10147 92 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 MLNP12872 115 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 TNNI3P19429 210 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 ZNF10P21506 573 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 PIGAP37287 484 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 MAGEA6P43360 314 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 CDKN2DP55273 166 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 RAB38P57729 211 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 TIAL1Q01085 375 aaKnown RBP eCLIP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 NXPE4Q6UWF7 544 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 ZNF572Q7Z3I7 529 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 THOC6Q86W42 341 aaKnown RBP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 ULK2Q8IYT8 1036 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 LIX1Q8N485 282 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 MORN4Q8NDC4 146 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 OR5L2Q8NGL0 311 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 OR14A16Q8NHC5 309 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 CCT6BQ92526 530 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 GAL3ST3Q96A11 431 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 OSBPL9Q96SU4 736 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 AICDAQ9GZX7 198 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 FOXD3Q9UJU5 478 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 ATG4BQ9Y4P1 393 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 CLDN16Q9Y5I7 305 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.28□□□□□ -0.44
MRPL55-224ENST00000464148 ARHGAP21Q5T5U3 1957 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 EML6Q6ZMW3 1958 aa12.28□□□□□ -0.44
MRPL55-224ENST00000464148 EPXP11678 715 aa12.27□□□□□ -0.45
MRPL55-224ENST00000464148 ENDOUP21128 410 aaKnown RBP12.27□□□□□ -0.45
MRPL55-224ENST00000464148 DCAF7P61962 342 aa12.27□□□□□ -0.45
MRPL55-224ENST00000464148 KCNJ2P63252 427 aa12.27□□□□□ -0.45
MRPL55-224ENST00000464148 RNF4P78317 190 aa12.27□□□□□ -0.45
MRPL55-224ENST00000464148 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.45
MRPL55-224ENST00000464148 CKAP4Q07065 602 aaKnown RBP12.27□□□□□ -0.45
MRPL55-224ENST00000464148 STX4Q12846 297 aa12.27□□□□□ -0.45
MRPL55-224ENST00000464148 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
MRPL55-224ENST00000464148 PCBP2Q15366 365 aaKnown RBP eCLIP12.27□□□□□ -0.45
MRPL55-224ENST00000464148 RBM20Q5T481 1227 aaKnown RBP12.27□□□□□ -0.45
MRPL55-224ENST00000464148 SLC22A10Q63ZE4 541 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms