RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CD96P40200 585 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ARL1P40616 181 aaPredicted RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 CCNG1P51959 295 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ID2Q02363 134 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 TUBA3CQ13748 450 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 UBAP2LQ14157 1087 aaKnown RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 TUBA3EQ6PEY2 450 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 OR4F6Q8NGB9 312 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ZNF483Q8TF39 744 aaPredicted RBP12.12□□□□□ -0.47
XRN1-203ENST00000463916 RGMAQ96B86 450 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 C1QTNF3Q9BXJ4 246 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ROGDIQ9GZN7 287 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 ATG4BQ9Y4P1 393 aa12.12□□□□□ -0.47
XRN1-203ENST00000463916 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
XRN1-203ENST00000463916 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 BSGP35613 385 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 VSNL1P62760 191 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 MEP1AQ16819 746 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 C18orf63Q68DL7 685 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 SPINK14Q6IE38 97 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
XRN1-203ENST00000463916 LETMD1Q6P1Q0 360 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 RPS19BP1Q86WX3 136 aaKnown RBP12.11□□□□□ -0.47
XRN1-203ENST00000463916 B3GNT7Q8NFL0 401 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 ADAMTS18Q8TE60 1221 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 ANKRD9Q96BM1 317 aaPredicted RBP12.11□□□□□ -0.47
XRN1-203ENST00000463916 HES7Q9BYE0 225 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 ALOXE3Q9BYJ1 711 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 FARSBQ9NSD9 589 aaKnown RBP12.11□□□□□ -0.47
XRN1-203ENST00000463916 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 MRPS33Q9Y291 106 aaKnown RBP12.11□□□□□ -0.47
XRN1-203ENST00000463916 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
XRN1-203ENST00000463916 FOXE1O00358 373 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 TMPRSS11DO60235 418 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SEMA7AO75326 666 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 WISP2O76076 250 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 GBAP04062 536 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 HSD17B3P37058 310 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 HNRNPH2P55795 449 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 HERVK_113P63132 956 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 CUL3Q13618 768 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 UNC50Q53HI1 259 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 MILR1Q7Z6M3 343 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 OR4N5Q8IXE1 308 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SLC5A8Q8N695 610 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ACMSDQ8TDX5 336 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 THAP3Q8WTV1 239 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 PTPMT1Q8WUK0 201 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 FAR1Q8WVX9 515 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 UCN3Q969E3 161 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 REPS1Q96D71 796 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 TMEM237Q96Q45 408 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ERVK-6Q9BXR3 956 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 VTI1BQ9UEU0 232 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 PPIEQ9UNP9 301 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 A0A0A6YYD5 115 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SMIM23A6NLE4 172 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 GABRR3A8MPY1 467 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 FGF17O60258 216 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 PRKNO60260 465 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 PRAMEF2O60811 474 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 CPN2P22792 545 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 TERF2Q15554 542 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SGO1Q5FBB7 561 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ZNF678Q5SXM1 525 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 FRG2Q64ET8 278 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ZNF324BQ6AW86 544 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 C16orf47Q6ZP98 133 aaPredicted RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 GPR180Q86V85 440 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ZNF227Q86WZ6 799 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ZCCHC7Q8N3Z6 543 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 FAM26EQ8N5C1 309 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ZNF321PQ8N8H1 164 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 MDS2Q8NDY4 140 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 EPS8L3Q8TE67 593 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 TRPC4APQ8TEL6 797 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SREK1Q8WXA9 508 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 NCLNQ969V3 563 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 FRG2BQ96QU4 278 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 DDX31Q9H8H2 851 aaKnown RBP12.1□□□□□ -0.47
XRN1-203ENST00000463916 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 PSD3Q9NYI0 1048 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 ASB4Q9Y574 426 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 SVILO95425 2214 aa12.1□□□□□ -0.47
XRN1-203ENST00000463916 TRBV11-1A0A0K0K1C0 115 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 TMEM200CA6NKL6 621 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 PROM1O43490 865 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 NEURL1O76050 574 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 IFNA16P05015 189 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 RNF224P0DH78 156 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 MLF1P58340 268 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms