RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SPATA6Q9NWH7 488 aaPredicted RBP11□□□□□ -0.65
TRAPPC3-205ENST00000462715 KLHL8Q9P2G9 620 aaPredicted RBP11□□□□□ -0.65
TRAPPC3-205ENST00000462715 CMAHPQ9Y471 501 aa11□□□□□ -0.65
TRAPPC3-205ENST00000462715 HRH3Q9Y5N1 445 aa11□□□□□ -0.65
TRAPPC3-205ENST00000462715 CLCA1A8K7I4 914 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 DFFAO00273 331 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 KDELR3O43731 214 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ATP6AP2O75787 350 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HLA-EP13747 358 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 NMBRP28336 390 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ACVRL1P37023 503 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 KIR2DL3P43628 341 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HAAOP46952 286 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 DGKQP52824 942 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 NUBP1P53384 320 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ERVK-8P63133 956 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 RUNX1T1Q06455 604 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 MTAPQ13126 283 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 SERINC3Q13530 473 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 PTPRNQ16849 979 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 AFMIDQ63HM1 303 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 METAP1DQ6UB28 335 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 AHSA2Q719I0 299 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 LUZP2Q86TE4 346 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 TRIM69Q86WT6 500 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 CHCHD4Q8N4Q1 142 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 NPWQ8N729 165 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 DTWD2Q8NBA8 298 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ZNF548Q8NEK5 533 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 OR2T12Q8NG77 320 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 Q96MT0 163 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 GABRG3Q99928 467 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 RIBC2Q9H4K1 309 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 SPASTQ9UBP0 616 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HS3ST2Q9Y278 367 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 PCDHGB7Q9Y5F8 929 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 NEMP2A6NFY4 417 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 MFSD11O43934 449 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 GMDSO60547 372 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 SNAPINO95295 136 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 WISP3O95389 354 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 APOC1P02654 83 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HOXB2P14652 356 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 SLC2A4P14672 509 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 FPR1P21462 350 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 SAT1P21673 171 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 PTPN3P26045 913 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 CTSOP43234 321 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 MAP2K3P46734 347 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ENPP2Q13822 863 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 GAS6Q14393 721 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 MICAQ29983 383 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HSD17B12Q53GQ0 312 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HSDL2Q6YN16 418 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ZNF704Q6ZNC4 412 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ARHGAP36Q6ZRI8 547 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 ARHGAP12Q8IWW6 846 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 INTS12Q96CB8 462 aaKnown RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 DPYSL5Q9BPU6 564 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 SLC39A8Q9C0K1 460 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 OR51E2Q9H255 320 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 CLEC4MQ9H2X3 399 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 CYP4F12Q9HCS2 524 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 PIH1D1Q9NWS0 290 aaKnown RBP10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 HCN2Q9UL51 889 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 V9GYQ6 96 aa10.99□□□□□ -0.65
TRAPPC3-205ENST00000462715 LOC100506127A0A0U1RQW1 187 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 WASHC1A8K0Z3 465 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 KPNA5O15131 536 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 ZBTB24O43167 697 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 LAMTOR5O43504 91 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 WDR47O94967 919 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 CSF3P09919 207 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 CKMT1AP12532 417 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 RPS3P23396 243 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 DNAJA1P31689 397 aaKnown RBP10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 GRK5P34947 590 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 CXCL12P48061 93 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 STK19P49842 368 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 DGKEP52429 567 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 CSHL1Q14406 222 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 RUNDC3AQ59EK9 446 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 PDZK1Q5T2W1 519 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 CERCAMQ5T4B2 595 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 FCRLBQ6BAA4 426 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 KIAA0930Q6ICG6 404 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 TMEM179BQ7Z7N9 219 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 CYP4Z1Q86W10 505 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 PHC2Q8IXK0 858 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 ATPAF2Q8N5M1 289 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 COQ8BQ96D53 544 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 HRASLS5Q96KN8 279 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 RPL10LQ96L21 214 aaKnown RBP10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 MRGPRX3Q96LB0 322 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 WACQ9BTA9 647 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 GABARAPL3Q9BY60 117 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 SP110Q9HB58 689 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 ZDHHC4Q9NPG8 344 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 EXD2Q9NVH0 621 aa10.98□□□□□ -0.65
TRAPPC3-205ENST00000462715 INTS7Q9NVH2 962 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms