RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ADGRE2Q9UHX3 823 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 NFU1Q9UMS0 254 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 PCDHGB6Q9Y5F9 930 aa9.5□□□□□ -0.89
SF3A3-204ENST00000462258 TNPO3Q9Y5L0 923 aaKnown RBP9.5□□□□□ -0.89
SF3A3-204ENST00000462258 NAV2Q8IVL1 2488 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 H0YIV9 168 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 STX16-NPEPL1H3BU86 382 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 PLPP1O14494 284 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 FCHO1O14526 889 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 STX16O14662 325 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 SMIM24O75264 130 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 SLC25A12O75746 678 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 UNC5CO95185 931 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 IFNA16P05015 189 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 RBP1P09455 135 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 MST1P26927 711 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 PIK3CBP42338 1070 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 CYB561P49447 251 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 RPS13P62277 151 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 TNFRSF17Q02223 184 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 STX4Q12846 297 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 AP5B1Q2VPB7 878 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 DEPDC1Q5TB30 811 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF468Q5VIY5 522 aaPredicted RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 METTL2BQ6P1Q9 378 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 GFRALQ6UXV0 394 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 GALNTL5Q7Z4T8 443 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 IFT20Q8IY31 132 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 ARMC10Q8N2F6 343 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 FAM98AQ8NCA5 519 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 OR52B6Q8NGF0 335 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 THAP3Q8WTV1 239 aaPredicted RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 PHF21BQ96EK2 531 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 FRMD6Q96NE9 622 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 MTERF1Q99551 399 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 CCDC77Q9BR77 488 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 SORBS1Q9BX66 1292 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 IPPKQ9H8X2 491 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 SEC14L3Q9UDX4 400 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF223Q9UK11 482 aaPredicted RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 PCTPQ9UKL6 214 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 FBXW2Q9UKT8 454 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 TMCO1Q9UM00 188 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 PPIEQ9UNP9 301 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 TSC22D4Q9Y3Q8 395 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 PCDHGA11Q9Y5H2 935 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 DIDO1Q9BTC0 2240 aaKnown RBP9.49□□□□□ -0.89
SF3A3-204ENST00000462258 UNC79Q9P2D8 2635 aa9.49□□□□□ -0.89
SF3A3-204ENST00000462258 ASPDHA6ND91 283 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 WIPF3A6NGB9 483 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 LRRTM2O43300 516 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 RIPK2O43353 540 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 NME2P1O60361 137 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CTNSO60931 367 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 LDB3O75112 727 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CLDN9O95484 217 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 SP1P08047 785 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 RPS17P08708 135 aaKnown RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 STSP08842 583 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 RHOXF2BP0C7M4 288 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 COL6A2P12110 1019 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 NME2P22392 152 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CPN2P22792 545 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 TRHRP34981 398 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CCNG1P51959 295 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 PER3P56645 1201 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 ID2Q02363 134 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 SERTAD2Q14140 314 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CPSF6Q16630 551 aaKnown RBP eCLIP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 C1QL3Q5VWW1 255 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 OR4C11Q6IEV9 310 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 SLC25A25Q6KCM7 469 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 TRMT10CQ7L0Y3 403 aaKnown RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 NUDT13Q86X67 352 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 TMEM132CQ8N3T6 1108 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 ZCCHC7Q8N3Z6 543 aaKnown RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 L3MBTL4Q8NA19 623 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 OR14A16Q8NHC5 309 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 DAZLQ92904 295 aaKnown RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 RGMAQ96B86 450 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CDK15Q96Q40 435 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 RHOXF2Q9BQY4 288 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 ZNF717Q9BY31 904 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 TSPAN10Q9H1Z9 355 aaPredicted RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 MRPL46Q9H2W6 279 aaKnown RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 NOL11Q9H8H0 719 aaKnown RBP9.48□□□□□ -0.89
SF3A3-204ENST00000462258 KCMF1Q9P0J7 381 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 PHF11Q9UIL8 331 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 RNF11Q9Y3C5 154 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 CLCA3PQ9Y6N3 262 aa9.48□□□□□ -0.89
SF3A3-204ENST00000462258 MYOCOSA0A1B0GUC4 107 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 C17orf105B2RV13 164 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 OR7A17O14581 309 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 FGF17O60258 216 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 PRKNO60260 465 aaPredicted RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 PRKRAO75569 313 aaKnown RBP9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ITGA10O75578 1167 aa9.47□□□□□ -0.89
SF3A3-204ENST00000462258 ZFAND5O76080 213 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms