RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 DNA2P51530 1060 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 NLRP11P59045 1033 aaKnown RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 CCZ1BP86790 482 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 CCZ1P86791 482 aaPredicted RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 BEX3Q00994 111 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 GABPB1Q06547 395 aaPredicted RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 GAGE5Q13069 117 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 GAGE6Q13070 117 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 SNTB2Q13425 540 aaKnown RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 RBM39Q14498 530 aaKnown RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 KIF19Q2TAC6 998 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 NADK2Q4G0N4 442 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 CMPK2Q5EBM0 449 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 C9orf50Q5SZB4 431 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ARHGAP11AQ6P4F7 1023 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ZNF852Q6ZMS4 543 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 C17orf107Q6ZR85 190 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 COX8CQ7Z4L0 72 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 C5orf24Q7Z6I8 188 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ADGRD2Q7Z7M1 963 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ZNF444Q8N0Y2 327 aaPredicted RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 TMEM99Q8N816 258 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 MINDY2Q8NBR6 621 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 OR13C3Q8NGS6 347 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ZNF583Q96ND8 569 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 PIGQQ9BRB3 760 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 RHNO1Q9BSD3 238 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 UBAC1Q9BSL1 405 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 LRRC1Q9BTT6 524 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ZSCAN5AQ9BUG6 496 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 POLR1EQ9GZS1 481 aaKnown RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 MTIF3Q9H2K0 278 aaKnown RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 ACTR8Q9H981 624 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 EBF2Q9HAK2 575 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 HOMER3Q9NSC5 361 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 NMRK1Q9NWW6 199 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 PRDM4Q9UKN5 801 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 FAF1Q9UNN5 650 aaPredicted RBP2.67□□□□□ -1.98
HPS3-203ENST00000460822 ENTPD4Q9Y227 616 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 MFHAS1Q9Y4C4 1052 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ETV7Q9Y603 341 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 SYNMO15061 1565 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 ADAMTS12P58397 1594 aa2.67□□□□□ -1.98
HPS3-203ENST00000460822 TAF1P21675 1872 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 DISP3Q9P2K9 1392 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 NCOA3Q9Y6Q9 1424 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CEP152O94986 1710 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 NUP153P49790 1475 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 SHANK2Q9UPX8 1470 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 URB2Q14146 1524 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 TRBV5-5A0A0J9YX44 114 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TMEM89A2RUT3 159 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 EME2A4GXA9 379 aaPredicted RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 ZNF732B4DXR9 585 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 EEF2KO00418 725 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 SMAD6O43541 496 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 GPRIN2O60269 458 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 ZBTB11O95625 1053 aaPredicted RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 MT-ND2P03891 347 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 SFTPBP07988 381 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TOP1P11387 765 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 RBMS1P29558 406 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 GDI1P31150 447 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 PTGER3P43115 390 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TNFRSF4P43489 277 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 NR2C2P49116 596 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CCL11P51671 97 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CLCN4P51793 760 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 LBX1P52954 281 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 NANOS2P60321 138 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 UBE2HP62256 183 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 HERV-K104P63124 156 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CCNA1P78396 465 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TAF13Q15543 124 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 USH1GQ495M9 461 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 LRRC23Q53EV4 343 aaPredicted RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 CFAP157Q5JU67 520 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 NKAIN2Q5VXU1 208 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CCBE1Q6UXH8 406 aaPredicted RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 UNQ6126/PRO20091Q6UXV3 157 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 ZYG11AQ6WRX3 759 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 BNIPLQ7Z465 357 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 ZCCHC7Q8N3Z6 543 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 GBP7Q8N8V2 638 aaPredicted RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 RNF149Q8NC42 400 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 FAM71CQ8NEG0 241 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 OR7A2PQ8NGA2 310 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 OR52K2Q8NGK3 314 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 FCGR1BQ92637 280 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 GLYATL1Q969I3 302 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 BPIFA2Q96DR5 249 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CXorf58Q96LI9 332 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TTC25Q96NG3 672 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 CDCA3Q99618 268 aaPredicted RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 EDEM2Q9BV94 578 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 FTHL17Q9BXU8 183 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 MTMR12Q9C0I1 747 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TM9SF3Q9HD45 589 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 EXOC1Q9NV70 894 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 RNF186Q9NXI6 227 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms