RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 TUBB6Q9BUF5 446 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 CHRNA10Q9GZZ6 450 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 BLZF1Q9H2G9 400 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM60AQ9NP50 221 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 G6PC2Q9NQR9 355 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PNPLA3Q9NST1 481 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 EXOC1Q9NV70 894 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 SCN3AQ9NY46 2000 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PKD2L2Q9NZM6 624 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF282Q9UDV7 671 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC13A4Q9UKG4 626 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PPIL1Q9Y3C6 166 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 FAM215AQ9Y5M1 114 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 COLEC10Q9Y6Z7 277 aa3.74□□□□□ -1.81
ECHDC1-211ENST00000460558 PLCE1Q9P212 2302 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GAGE12BA1L429 117 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 RGSL1A5PLK6 1076 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GAGE12HA6NDE8 117 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GABRR3A8MPY1 467 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 C2orf74A8MZ97 194 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 AHRRA9YTQ3 701 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GOLGA8SH3BPF8 625 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 KLRC4-KLRK1H3BQV0 150 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GAPDHSO14556 408 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 UBFD1O14562 309 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 DNPH1O43598 174 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 KLRC4O43908 158 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 SHOX2O60902 331 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 NEURL1O76050 574 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ITGALP20701 1170 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 HNF1AP20823 631 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 COMTP21964 271 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CASP1P29466 404 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 HSPA9P38646 679 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CASP2P42575 452 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GABRA4P48169 554 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 SPINT3P49223 89 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 MAN2A2P49641 1150 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 COMPP49747 757 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 EMP2P54851 167 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CASP9P55211 416 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 DCDC1P59894 354 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 VAMP2P63027 116 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ACTG1P63261 375 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GCNT1Q02742 428 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 TRAF2Q12933 501 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GPS1Q13098 491 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CCNIQ14094 377 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 KRT33BQ14525 404 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 TIGD6Q17RP2 521 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 NRN1LQ496H8 165 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 C1orf185Q5T7R7 199 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 FCRLBQ6BAA4 426 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 RTL6Q6ICC9 239 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 C1orf122Q6ZSJ8 110 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 BBS12Q6ZW61 710 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 PLEKHM3Q6ZWE6 761 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 BNIPLQ7Z465 357 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 AMZ2Q86W34 360 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ADGRG5Q8IZF4 528 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ACVR1CQ8NER5 493 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC22A8Q8TCC7 542 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 PIH1D2Q8WWB5 315 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 LCN9Q8WX39 176 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 GLYATL1Q969I3 302 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 BOD1Q96IK1 185 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 C12orf66Q96MD2 445 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CFAP57Q96MR6 1250 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 NUDCD1Q96RS6 583 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ZSCAN5AQ9BUG6 496 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 SPATA16Q9BXB7 569 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CUTCQ9NTM9 273 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 ZNF701Q9NV72 531 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 DKK2Q9UBU2 259 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 DAPP1Q9UN19 280 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 PLCL2Q9UPR0 1127 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 KLF13Q9Y2Y9 288 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 RNF114Q9Y508 228 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 CLIC4Q9Y696 253 aa3.73□□□□□ -1.81
ECHDC1-211ENST00000460558 LOC102723996A0A087X1L8 192 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 A0A0J9YYE9 177 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 C1orf232A0A0U1RR37 186 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 NPEPPSL1A6NEC2 478 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ZAR1LA6NP61 321 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CAPN14A8MX76 684 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 H0Y3Z8 333 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 HCRTR1O43613 425 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CCNT2O60583 730 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 MTX2O75431 263 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ERN1O75460 977 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 VENTXO95231 258 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 CLDN7O95471 211 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 GPANK1O95872 356 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 TRBC1P01850 177 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 SLC35G4P0C7Q5 338 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 GABRA1P14867 456 aa3.72□□□□□ -1.81
ECHDC1-211ENST00000460558 ITGA2P17301 1181 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms