RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 MEP1AQ16819 746 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 GGTA1PQ4G0N0 100 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 ACER2Q5QJU3 275 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 FRG2Q64ET8 278 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 TTC19Q6DKK2 380 aaPredicted RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 LETMD1Q6P1Q0 360 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 MILR1Q7Z6M3 343 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 BEST3Q8N1M1 668 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 SLC5A8Q8N695 610 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 NFAM1Q8NET5 270 aaPredicted RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 ELP5Q8TE02 316 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 MTFMTQ96DP5 389 aaKnown RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 TMEM237Q96Q45 408 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 FRG2BQ96QU4 278 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 NPAS2Q99743 824 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 SLC29A3Q9BZD2 475 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.34□□□□□ -0.27
THBS3-204ENST00000460050 PSD3Q9NYI0 1048 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.34□□□□□ -0.27
THBS3-204ENST00000460050 DCDC2Q9UHG0 476 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
THBS3-204ENST00000460050 V9GYY5 206 aaPredicted RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 SETXQ7Z333 2677 aaKnown RBP13.34□□□□□ -0.27
THBS3-204ENST00000460050 TRAV17A0A0B4J275 112 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 MAN1A2O60476 641 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 CTNSO60931 367 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 LDB3O75112 727 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 CDH16O75309 829 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 EEDO75530 441 aaKnown RBP13.33□□□□□ -0.28
THBS3-204ENST00000460050 SUPT7LO94864 414 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 GNLYP22749 145 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 CPN2P22792 545 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 BSGP35613 385 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 ST13P50502 369 aaKnown RBP13.33□□□□□ -0.28
THBS3-204ENST00000460050 ARFIP1P53367 373 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 CLCQ05315 142 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 IFT88Q13099 833 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 RASA2Q15283 850 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 TERF2Q15554 542 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 UNC50Q53HI1 259 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 ZNF678Q5SXM1 525 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 SLC22A9Q8IVM8 553 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 ZCCHC7Q8N3Z6 543 aaKnown RBP13.33□□□□□ -0.28
THBS3-204ENST00000460050 B3GNT7Q8NFL0 401 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 TRPC4APQ8TEL6 797 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 SERPINI1Q99574 410 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
THBS3-204ENST00000460050 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 PHF11Q9UIL8 331 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 HIVEP3Q5T1R4 2406 aa13.33□□□□□ -0.28
THBS3-204ENST00000460050 HECTD1Q9ULT8 2610 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 DOPEY2Q9Y3R5 2298 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 TRBV11-1A0A0K0K1C0 115 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 BLACEA4D250 179 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 SYNDIG1LA6NDD5 238 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 TCP11X1B4DZS4 312 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 OR4F21O95013 312 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 SEMA3DO95025 777 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 IFNA16P05015 189 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 PRKAA2P54646 552 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 HNRNPH2P55795 449 aaKnown RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 ID2Q02363 134 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 STX4Q12846 297 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 ELAVL1Q15717 326 aaKnown RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 SGO1Q5FBB7 561 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 C10orf62Q5T681 223 aaPredicted RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 FAM219BQ5XKK7 198 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 RPUSD3Q6P087 351 aaKnown RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 GPR180Q86V85 440 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 RPS19BP1Q86WX3 136 aaKnown RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 LGI4Q8N135 537 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 APCDD1LQ8NCL9 501 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 MYRIPQ8NFW9 859 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 OR2W6PQ8NHA6 318 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 SUN3Q8TAQ9 357 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 ALOXE3Q9BYJ1 711 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 ELOVL6Q9H5J4 265 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 CDCP1Q9H5V8 836 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 DDX31Q9H8H2 851 aaKnown RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 AGPAT4Q9NRZ5 378 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 FARSBQ9NSD9 589 aaKnown RBP13.32□□□□□ -0.28
THBS3-204ENST00000460050 MS4A12Q9NXJ0 267 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 TRPS1Q9UHF7 1281 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 ZNF225Q9UK10 706 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 ATG4BQ9Y4P1 393 aa13.32□□□□□ -0.28
THBS3-204ENST00000460050 TLDC2A0PJX2 215 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 GABRR3A8MPY1 467 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 TMPRSS11DO60235 418 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 PRAMEF2O60811 474 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 PROCP04070 461 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 NUDT17P0C025 328 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 IMPDH1P20839 514 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 CLCN2P51788 898 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 TNFRSF17Q02223 184 aa13.31□□□□□ -0.28
THBS3-204ENST00000460050 MRPL49Q13405 166 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms