RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 UTP15Q8TED0 518 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CREB3L4Q8TEY5 395 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 RASSF5Q8WWW0 418 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 METTL21AQ8WXB1 218 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR5P2Q8WZ92 322 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM162AQ96A26 154 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PPWD1Q96BP3 646 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 TM4SF18Q96CE8 201 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCDC124Q96CT7 223 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC7A6OSQ96CW6 309 aaPredicted RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 COQ8BQ96D53 544 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ASB9Q96DX5 294 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 TM4SF19Q96DZ7 209 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 EGLN2Q96KS0 407 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ART5Q96L15 291 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PPM1MQ96MI6 270 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 EDEM2Q9BV94 578 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SPATA5L1Q9BVQ7 753 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 UGT2B28Q9BY64 529 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CADM1Q9BY67 442 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ALG2Q9H553 416 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF768Q9H5H4 540 aaKnown RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF385DQ9H6B1 395 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ARMC7Q9H6L4 198 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 DCLRE1BQ9H816 532 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 NANOGQ9H9S0 305 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF304Q9HCX3 659 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC35C2Q9NQQ7 365 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRDM7Q9NQW5 492 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 CUTCQ9NTM9 273 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ACSS1Q9NUB1 689 aaPredicted RBP5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 EXD2Q9NVH0 621 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 ADPRHL2Q9NX46 363 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 MAGEL2Q9UJ55 1249 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 RPS6KA6Q9UK32 745 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC13A4Q9UKG4 626 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 PILRAQ9UKJ1 303 aa5.54□□□□□ -1.52
RNU1-88P-201ENST00000459274 MN1Q10571 1320 aaPredicted RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 LOC105369274A0A096LPK9 316 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 A0A0A6YYD5 115 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 IGHV5-51A0A0C4DH38 117 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 IGKV1-8A0A0C4DH67 115 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 LOC102723532A0A0G2JNH3 316 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 ELOVL7A1L3X0 281 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 C9J4A7 227 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 RTCAO00442 366 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 GNGT2O14610 69 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 PROM1O43490 865 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 B4GAT1O43505 415 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 GALR3O60755 368 aaPredicted RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 TBX19O60806 448 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 CTSVO60911 334 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 SERPINB7O75635 380 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 KLHL18O94889 574 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 SCELO95171 688 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 NSA2O95478 260 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 BAG2O95816 211 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 STATHP02808 62 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 NTRK1P04629 796 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 ANKRD34CP0C6C1 535 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 MSL3P1P0C860 447 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 UMPSP11172 480 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 LAMP1P11279 417 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 FCGR1AP12314 374 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 PORP16435 677 aaPredicted RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 IL1RNP18510 177 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 CAPN3P20807 821 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 SDHBP21912 280 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 FBLP22087 321 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 ACP1P24666 158 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 TACR1P25103 407 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 CERS1P27544 350 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCT3P49368 545 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 XKP51811 444 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC7A2P52569 658 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 HNRNPFP52597 415 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 LIM2P55344 173 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 RAB15P59190 212 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 KCNJ2P63252 427 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 TNFRSF17Q02223 184 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 LIPEQ05469 1076 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 VAC14Q08AM6 782 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 HSPB3Q12988 150 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 DEFB110Q30KQ9 67 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM98BQ52LJ0 330 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 DCAF12Q5T6F0 453 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 HLA-DQA1Q5Y7H0 255 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 FRMPD2BQ6IN97 320 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM71E1Q6IPT2 247 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM214Q6NUQ4 689 aaKnown RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC48A1Q6P1K1 146 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 AAGABQ6PD74 315 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 CEACAM20Q6UY09 585 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 DNAJC14Q6Y2X3 702 aaPredicted RBP5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 FKBP9P1Q75LS8 142 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 ANKRD46Q86W74 232 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 KRT73Q86Y46 540 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 NAXDQ8IW45 347 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF595Q8IYB9 648 aa5.53□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR4N4Q8N0Y3 316 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms