RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PLPP1O14494 284 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 CDK2AP1O14519 115 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 RGS16O15492 202 aaPredicted RBP15.15■□□□□ 0.02
CD28-203ENST00000458610 GUCY1B2O75343 617 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 ESRRBO95718 433 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 NAGLUP54802 743 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 SLC26A5P58743 744 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 LETMD1Q6P1Q0 360 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 SHISA5Q8N114 240 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 TMEM132CQ8N3T6 1108 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 RNF175Q8N4F7 328 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 RBMXL3Q8N7X1 1067 aaKnown RBP15.15■□□□□ 0.02
CD28-203ENST00000458610 CDYL2Q8N8U2 506 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
CD28-203ENST00000458610 FAM47BQ8NA70 645 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 DNAJB14Q8TBM8 379 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 TANKQ92844 425 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 MAPKAP1Q9BPZ7 522 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 WDR77Q9BQA1 342 aaPredicted RBP15.15■□□□□ 0.02
CD28-203ENST00000458610 NECTIN3Q9NQS3 549 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 STMN3Q9NZ72 180 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 ABI3Q9P2A4 366 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 B3GNT3Q9Y2A9 372 aa15.15■□□□□ 0.02
CD28-203ENST00000458610 SPTA1P02549 2419 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 A8MUI8 341 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 J3QKU1 62 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 PPP6CO00743 305 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 CRCPO75575 148 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 ITGAMP11215 1152 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 PLA2G2AP14555 144 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 BSGP35613 385 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 ARG2P78540 354 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 TLR1Q15399 786 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 NADK2Q4G0N4 442 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 LIPMQ5VYY2 423 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 LINC00696Q6ZRV3 163 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 RPS27LQ71UM5 84 aaKnown RBP15.14■□□□□ 0.01
CD28-203ENST00000458610 SLC5A8Q8N695 610 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 SIRT6Q8N6T7 355 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 PSMF1Q92530 271 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 MFRPQ9BY79 579 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 ALOXE3Q9BYJ1 711 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 ILKAPQ9H0C8 392 aaPredicted RBP15.14■□□□□ 0.01
CD28-203ENST00000458610 ADAP2Q9NPF8 381 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 PNO1Q9NRX1 252 aaKnown RBP15.14■□□□□ 0.01
CD28-203ENST00000458610 SLC12A4Q9UP95 1085 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 PCSK5Q92824 1860 aa15.14■□□□□ 0.01
CD28-203ENST00000458610 SAGE2PA6NJ88 616 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 MANBAO00462 879 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 DYRK3O43781 588 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 TRIM13O60858 407 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 PDYNP01213 254 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 IFNA16P05015 189 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 FAM58BPP0C7Q3 252 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 MYZAPP0CAP1 466 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 TNNI3P19429 210 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 SOX11P35716 441 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 CSTF3Q12996 717 aaKnown RBP15.13■□□□□ 0.01
CD28-203ENST00000458610 ELAVL1Q15717 326 aaKnown RBP15.13■□□□□ 0.01
CD28-203ENST00000458610 MEP1AQ16819 746 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 CCNYL2Q5T2Q4 361 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 SLC6A19Q695T7 634 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 H3F3CQ6NXT2 135 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 Q6ZS92 163 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 IQCKQ8N0W5 287 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 LGI4Q8N135 537 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 HAS2Q92819 552 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 DAZLQ92904 295 aaKnown RBP15.13■□□□□ 0.01
CD28-203ENST00000458610 RBM18Q96H35 190 aaKnown RBP15.13■□□□□ 0.01
CD28-203ENST00000458610 CNDP1Q96KN2 507 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 TRMOQ9BU70 441 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 SORBS1Q9BX66 1292 aaKnown RBP15.13■□□□□ 0.01
CD28-203ENST00000458610 RNF32Q9H0A6 362 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 GSTO2Q9H4Y5 243 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 RPF2Q9H7B2 306 aaKnown RBP15.13■□□□□ 0.01
CD28-203ENST00000458610 MID1IP1Q9NPA3 183 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 VPS29Q9UBQ0 182 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 VTI1BQ9UEU0 232 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 CLCA3PQ9Y6N3 262 aa15.13■□□□□ 0.01
CD28-203ENST00000458610 A0A0A6YYD5 115 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 A8MUA0 341 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 PROM1O43490 865 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 ETHE1O95571 254 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 COX7A2P14406 83 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 CLCN2P51788 898 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 TNFRSF17Q02223 184 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 TLE1Q04724 770 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 ZNF844Q08AG5 666 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 CEP85LQ5SZL2 805 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 MRM1Q6IN84 353 aaKnown RBP15.12■□□□□ 0.01
CD28-203ENST00000458610 LRIG3Q6UXM1 1119 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 FRMD7Q6ZUT3 714 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 CLNKQ7Z7G1 428 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 METTL4Q8N3J2 472 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 B3GNT7Q8NFL0 401 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 SUN3Q8TAQ9 357 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 ELP5Q8TE02 316 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 CSF3RQ99062 836 aa15.12■□□□□ 0.01
CD28-203ENST00000458610 PELOQ9BRX2 385 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms