RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CDC7O00311 574 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 DNALI1O14645 258 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 NRDCO43847 1150 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 HCN1O60741 890 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 CTNSO60931 367 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 BANF1O75531 89 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 NADKO95544 446 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 ADH7P40394 386 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 MTTPP55157 894 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 LIM2P55344 173 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 RNF4P78317 190 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 SERTAD2Q14140 314 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 SLBPQ14493 270 aaKnown RBP eCLIP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 RIPPLY2Q5TAB7 128 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 STEAP4Q687X5 459 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 ZNF585AQ6P3V2 769 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 TRIM40Q6P9F5 258 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 ABHD17CQ6PCB6 329 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 OPN5Q6U736 354 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 ARSKQ6UWY0 536 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 VN1R5Q7Z5H4 357 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 KRT78Q8N1N4 520 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 NKAPQ8N5F7 415 aaKnown RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 OR10Q1Q8NGQ4 319 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 SLCO2A1Q92959 643 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 KIAA1191Q96A73 305 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 RHBDF1Q96CC6 855 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 CSF3RQ99062 836 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 WDR83Q9BRX9 315 aaKnown RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 CAPS2Q9BXY5 557 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 LIN28AQ9H9Z2 209 aaKnown RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 SH2D2AQ9NP31 389 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 SACM1LQ9NTJ5 587 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 CCM2LQ9NUG4 571 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 DNAJB12Q9NXW2 375 aaKnown RBP9.65□□□□□ -0.86
HDLBP-227ENST00000458564 GPRC5BQ9NZH0 403 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 B4GALT7Q9UBV7 327 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 ST6GALNAC2Q9UJ37 374 aa9.65□□□□□ -0.86
HDLBP-227ENST00000458564 GOLGA6L10A0A0M3HER8 536 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 G3V3Y1 287 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF354AO60765 605 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 H2AFYO75367 372 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 FAM155BO75949 473 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 WDR47O94967 919 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 IFNA16P05015 189 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 CELA3AP09093 270 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 CCL3P10147 92 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 GABRA1P14867 456 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 KLK2P20151 261 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ENDOUP21128 410 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 CERS1P27544 350 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 MAN2A2P49641 1150 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 PLA2G16P53816 162 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 TBL3Q12788 808 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 BMPR2Q13873 1038 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 PPP1R7Q15435 360 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 MPEG1Q2M385 716 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF750Q32MQ0 723 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 C1orf185Q5T7R7 199 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 WLSQ5T9L3 541 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 TRMT10BQ6PF06 316 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 FAM47EQ6ZV65 393 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 CLNKQ7Z7G1 428 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ZC3HC1Q86WB0 502 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 LIX1LQ8IVB5 337 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 C7orf57Q8NEG2 295 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 OR5L2Q8NGL0 311 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 NUBPLQ8TB37 319 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 SLC2A12Q8TD20 617 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ACTRT1Q8TDG2 376 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 CCT6BQ92526 530 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 LRRC39Q96DD0 335 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 WDR34Q96EX3 536 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ALPK1Q96QP1 1244 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 EGFL8Q99944 293 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 POLDIP3Q9BY77 421 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ALOXE3Q9BYJ1 711 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 CLEC4MQ9H2X3 399 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ZNF703Q9H7S9 590 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 LYRM4Q9HD34 91 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 PPANQ9NQ55 473 aaKnown RBP9.64□□□□□ -0.87
HDLBP-227ENST00000458564 DLL4Q9NR61 685 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 RASSF1Q9NS23 344 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 ATG4BQ9Y4P1 393 aa9.64□□□□□ -0.87
HDLBP-227ENST00000458564 TRGV5A0A0B4J1U4 118 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 ANKDD1BA6NHY2 528 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 C17orf105B2RV13 164 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 PRAMEF4O60810 478 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 SCELO95171 688 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 P04436 131 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 FOSL1P15407 271 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 IVDP26440 423 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 GGT5P36269 586 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 GDF5P43026 501 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 KCNC1P48547 511 aa9.63□□□□□ -0.87
HDLBP-227ENST00000458564 DNASE1L1P49184 302 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms