RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 OC90Q02509 493 aaPredicted RBP17.49■□□□□ 0.39
USP39-209ENST00000458268 CLCQ05315 142 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 PCDH1Q08174 1060 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 UNC50Q53HI1 259 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 ACER2Q5QJU3 275 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 FRG2Q64ET8 278 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 IGFL2Q6UWQ7 119 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 SCUBE1Q8IWY4 988 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 TMEM151AQ8N4L1 468 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 SLC5A8Q8N695 610 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 CDYL2Q8N8U2 506 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 SUN3Q8TAQ9 357 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 WDR20Q8TBZ3 569 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 ZBTB9Q96C00 473 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 FRG2BQ96QU4 278 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 NTMT1Q9BV86 223 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 ERVK-6Q9BXR3 956 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 SLC29A3Q9BZD2 475 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 CDCP1Q9H5V8 836 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 LYRM4Q9HD34 91 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 MMP25Q9NPA2 562 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 DCDC2Q9UHG0 476 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 PCDHGA10Q9Y5H3 936 aa17.49■□□□□ 0.39
USP39-209ENST00000458268 CYR61O00622 381 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 EEDO75530 441 aaKnown RBP17.48■□□□□ 0.39
USP39-209ENST00000458268 HMOX2P30519 316 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 SRSF11Q05519 484 aaKnown RBP17.48■□□□□ 0.39
USP39-209ENST00000458268 MEP1AQ16819 746 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 TCHHL1Q5QJ38 904 aaPredicted RBP17.48■□□□□ 0.39
USP39-209ENST00000458268 ZNF678Q5SXM1 525 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 C18orf63Q68DL7 685 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 LETMD1Q6P1Q0 360 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 LCA5Q86VQ0 697 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 NUDT13Q86X67 352 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 SLC22A9Q8IVM8 553 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 SELENOMQ8WWX9 145 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 SERPINI1Q99574 410 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 ALOXE3Q9BYJ1 711 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 DEFB126Q9BYW3 111 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 FARSBQ9NSD9 589 aaKnown RBP17.48■□□□□ 0.39
USP39-209ENST00000458268 SLC12A4Q9UP95 1085 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 NTNG1Q9Y2I2 539 aa17.48■□□□□ 0.39
USP39-209ENST00000458268 OR5H15A6NDH6 313 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 GLOD5A6NK44 160 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 GABRR3A8MPY1 467 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 CDH16O75309 829 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 KRT4P19013 534 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 HNRNPH2P55795 449 aaKnown RBP17.47■□□□□ 0.39
USP39-209ENST00000458268 MRPL49Q13405 166 aaKnown RBP17.47■□□□□ 0.39
USP39-209ENST00000458268 NR6A1Q15406 480 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 GPR180Q86V85 440 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 DOK4Q8TEW6 326 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 NCLNQ969V3 563 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 MRPL1Q9BYD6 325 aaKnown RBP17.47■□□□□ 0.39
USP39-209ENST00000458268 IQCGQ9H095 443 aaKnown RBP17.47■□□□□ 0.39
USP39-209ENST00000458268 PPCSQ9HAB8 311 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 KLHL1Q9NR64 748 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 KCMF1Q9P0J7 381 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 PHF11Q9UIL8 331 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 EMCNQ9ULC0 261 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 SNX6Q9UNH7 406 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 CLCA3PQ9Y6N3 262 aa17.47■□□□□ 0.39
USP39-209ENST00000458268 TENM4Q6N022 2769 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 TRAV17A0A0B4J275 112 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 CTNSO60931 367 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 PDYNP01213 254 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 TLX1P31314 330 aaPredicted RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 BSGP35613 385 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 BUD31P41223 144 aaPredicted RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 CCT5P48643 541 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 TNFSF10P50591 281 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 TNFRSF17Q02223 184 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 FAM180AQ6UWF9 173 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 GPRIN3Q6ZVF9 776 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 RPS19BP1Q86WX3 136 aaKnown RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 TDRPQ86YL5 185 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 B3GNT7Q8NFL0 401 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 AENQ8WTP8 325 aaKnown RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 NPAS2Q99743 824 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 UTP23Q9BRU9 249 aaKnown RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 OR8D2Q9GZM6 311 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 RPF2Q9H7B2 306 aaKnown RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 ADAP2Q9NPF8 381 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 AGPAT4Q9NRZ5 378 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 LYARQ9NX58 379 aaKnown RBP17.46■□□□□ 0.39
USP39-209ENST00000458268 TRPS1Q9UHF7 1281 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 GRID1Q9ULK0 1009 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 ATG4BQ9Y4P1 393 aa17.46■□□□□ 0.39
USP39-209ENST00000458268 TCP11X1B4DZS4 312 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 FOXE1O00358 373 aaPredicted RBP17.45■□□□□ 0.38
USP39-209ENST00000458268 TMPRSS11DO60235 418 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 FGF17O60258 216 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 SCELO95171 688 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 PROCP04070 461 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 KLK1P06870 262 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 FAM58BPP0C7Q3 252 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 IMPDH1P20839 514 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 TSFMP43897 325 aaKnown RBP17.45■□□□□ 0.38
USP39-209ENST00000458268 CLCN2P51788 898 aa17.45■□□□□ 0.38
USP39-209ENST00000458268 PRKAA2P54646 552 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms