RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 EIF5A2Q9GZV4 153 aaKnown RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 CD320Q9NPF0 282 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 HRASLS2Q9NWW9 162 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 A0A1W2PP18 115 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 MT-ND5P03915 603 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 AIMP2Q13155 320 aaKnown RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 CCINQ13939 588 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 ITPRIPL2Q3MIP1 535 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 ZNF404Q494X3 552 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 TPGS2Q68CL5 300 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 C12orf40Q86WS4 652 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 PSKH2Q96QS6 385 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 HTRA2O43464 458 aaPredicted RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 FIP1L1Q6UN15 594 aaKnown RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 CEACAM19Q7Z692 300 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 TP63Q9H3D4 680 aaPredicted RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 FGF18O76093 207 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 C8BP07358 591 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 POU6F2P78424 691 aaPredicted RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 HAGHLQ6PII5 290 aaPredicted RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 FIGNL1Q6PIW4 674 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 C12orf76Q8N812 135 aaPredicted RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 ZNF599Q96NL3 588 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 SECISBP2Q96T21 854 aaKnown RBP18.91■□□□□ 0.62
SNX27-204ENST00000458013 GPR22Q99680 433 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 SMOC2Q9H3U7 446 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 TLR9Q9NR96 1032 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 ACTL7AQ9Y615 435 aa18.91■□□□□ 0.62
SNX27-204ENST00000458013 A0A1W2PP55 124 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 COCHO43405 550 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 AKR1C4P17516 323 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 STC1P52823 247 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 CDKN2DP55273 166 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 SLAMF1Q13291 335 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ABRAXAS2Q15018 415 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ENPP6Q6UWR7 440 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 SLC44A3Q8N4M1 653 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 SMPDL3AQ92484 453 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 PEX13Q92968 403 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 UNC119BA6NIH7 251 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 NPIPA2E9PIF3 369 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 NPIPA3F8WFD2 350 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 MAGEA3P43357 314 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 FASLGP48023 281 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ASTE1Q2TB18 679 aaPredicted RBP18.9■□□□□ 0.62
SNX27-204ENST00000458013 NANOGP8Q6NSW7 305 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 NANOGQ9H9S0 305 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 RAD1O60671 282 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 PAK4O96013 591 aaPredicted RBP18.9■□□□□ 0.62
SNX27-204ENST00000458013 H2BFMP0C1H6 154 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 GLP1RP43220 463 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 MAP4K2Q12851 820 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 RHEBQ15382 184 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 RPS26P11Q5JNZ5 115 aaPredicted RBP18.9■□□□□ 0.62
SNX27-204ENST00000458013 FAM69BQ5VUD6 431 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ZSCAN4Q8NAM6 433 aaPredicted RBP18.9■□□□□ 0.62
SNX27-204ENST00000458013 NUP43Q8NFH3 380 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 OSTF1Q92882 214 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ACDQ96AP0 544 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 B3GALT1Q9Y5Z6 326 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 FPR1P21462 350 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 TMEM164Q5U3C3 297 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 KLBQ86Z14 1044 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 RFT1Q96AA3 541 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 MTMR10Q9NXD2 777 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ABCB7O75027 752 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 RP2O75695 350 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 AHSA1O95433 338 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 AGR2O95994 175 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 HLA-DPB1P04440 258 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 CELP19835 753 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 SCGB3A2Q96PL1 93 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 ARHGAP9Q9BRR9 750 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 PRTFDC1Q9NRG1 225 aa18.9■□□□□ 0.62
SNX27-204ENST00000458013 FAM171A2A8MVW0 826 aa18.89■□□□□ 0.62
SNX27-204ENST00000458013 KLK3P07288 261 aaPredicted RBP18.89■□□□□ 0.62
SNX27-204ENST00000458013 FGF3P11487 239 aaPredicted RBP18.89■□□□□ 0.62
SNX27-204ENST00000458013 LEPRP48357 1165 aaKnown RBP18.89■□□□□ 0.62
SNX27-204ENST00000458013 FAM43BQ6ZT52 329 aaPredicted RBP18.89■□□□□ 0.62
SNX27-204ENST00000458013 TPRG1Q6ZUI0 275 aa18.89■□□□□ 0.62
SNX27-204ENST00000458013 GPRIN1Q7Z2K8 1008 aa18.89■□□□□ 0.62
SNX27-204ENST00000458013 CMASQ8NFW8 434 aaPredicted RBP18.89■□□□□ 0.62
SNX27-204ENST00000458013 ADAMTS6Q9UKP5 1117 aa18.89■□□□□ 0.62
SNX27-204ENST00000458013 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 SORBS2O94875 1100 aaKnown RBP18.89■□□□□ 0.61
SNX27-204ENST00000458013 EBLN1P0CF75 366 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 SLC36A3Q495N2 470 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 Q6ZVL8 140 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 TMEM110Q86TL2 294 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 PRR18Q8N4B5 295 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 ZNF514Q96K75 400 aaPredicted RBP18.89■□□□□ 0.61
SNX27-204ENST00000458013 EBF1Q9UH73 591 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 WASF3Q9UPY6 502 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 INSL5Q9Y5Q6 135 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 IGKV6D-41A0A0C4DH26 115 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 MCCD1P59942 119 aaPredicted RBP18.89■□□□□ 0.61
SNX27-204ENST00000458013 BRI3BPQ8WY22 251 aa18.89■□□□□ 0.61
SNX27-204ENST00000458013 MAFIPQ8WZ33 124 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms