RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 EXTL1Q92935 676 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 C11orf24Q96F05 449 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 MRPL1Q9BYD6 325 aaKnown RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ACPTQ9BZG2 426 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 C20orf27Q9GZN8 174 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 TUBB1Q9H4B7 451 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF395Q9H8N7 513 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 COPS7BQ9H9Q2 264 aaPredicted RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 EML4Q9HC35 981 aaKnown RBP9.46□□□□□ -0.9
ATG4A-206ENST00000457035 PRM3Q9NNZ6 103 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 NMRK1Q9NWW6 199 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 AHSPQ9NZD4 102 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 VPS29Q9UBQ0 182 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ZDHHC2Q9UIJ5 367 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ADAM29Q9UKF5 820 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 TRAF6Q9Y4K3 522 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CCL27Q9Y4X3 112 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 ASB4Q9Y574 426 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.9
ATG4A-206ENST00000457035 BOD1L1Q8NFC6 3051 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 LOC102723996A0A087X1L8 192 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 A0A1W2PQ72 361 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 MASP2O00187 686 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PSMD12O00232 456 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PCDH17O14917 1159 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PROM1O43490 865 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 TMPRSS11DO60235 418 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PRMT3O60678 531 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 B4GALT2O60909 372 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 LYPLA1O75608 230 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 KLK1P06870 262 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 BGNP21810 368 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 TPP2P29144 1249 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 MMP16P51512 607 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 HNRNPH2P55795 449 aaKnown RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 ABCE1P61221 599 aaKnown RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 HMGCS1Q01581 520 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 LY6DQ14210 128 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 NSDHLQ15738 373 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 MINDY4Q4G0A6 757 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 KANK2Q63ZY3 851 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 FAAH2Q6GMR7 532 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 BORAQ6PGQ7 559 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 QSOX2Q6ZRP7 698 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 RNF165Q6ZSG1 346 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 Q6ZSR9 355 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 TMEM102Q8N9M5 508 aaPredicted RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 LSM14AQ8ND56 463 aaKnown RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 APOBEC4Q8WW27 367 aaKnown RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 C8orf44Q96CB5 159 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PTCHD1Q96NR3 888 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 CSF3RQ99062 836 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 SORT1Q99523 831 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PAIP2Q9BPZ3 127 aaKnown RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 USB1Q9BQ65 265 aaKnown RBP9.45□□□□□ -0.9
ATG4A-206ENST00000457035 RBCK1Q9BYM8 510 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 ING2Q9H160 280 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 PRDM9Q9NQV7 894 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 SIRT5Q9NXA8 310 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 NKIRAS1Q9NYS0 192 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 FBXW2Q9UKT8 454 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 MAN2B2Q9Y2E5 1009 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 ATG4BQ9Y4P1 393 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 DNAJC15Q9Y5T4 150 aa9.45□□□□□ -0.9
ATG4A-206ENST00000457035 IGKV3D-11A0A0A0MRZ8 115 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 A0A1W2PR48 441 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 ARGFXA6NJG6 315 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 WASHC1A8K0Z3 465 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 TMEM114B3SHH9 223 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 TMEM233B4DJY2 109 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 NPIPB8E9PQR5 432 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 TGFBR3LH3BV60 316 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PEX12O00623 359 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 CTNSO60931 367 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 CRCPO75575 148 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 GBAP04062 536 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 FAM58BPP0C7Q3 252 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 C8orf89P0DMQ9 161 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 COX6A1P12074 109 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 JAK1P23458 1154 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 GRK2P25098 689 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 SLC1A6P48664 564 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 HSD17B7P56937 341 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 SOX8P57073 446 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 RAE1P78406 368 aaKnown RBP9.44□□□□□ -0.9
ATG4A-206ENST00000457035 STX3Q13277 289 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 KIAA0040Q15053 153 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PCOLCEQ15113 449 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 DCAF10Q5QP82 559 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 MFSD4BQ5TF39 518 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 C18orf63Q68DL7 685 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 GALNT18Q6P9A2 607 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 LANCL3Q6ZV70 420 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 NDUFAF7Q7L592 441 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PAGE2Q7Z2X7 111 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 COMMD6Q7Z4G1 85 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 CPEB2Q7Z5Q1 589 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms