RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 SHANK1Q9Y566 2161 aa6.64□□□□□ -1.35
COMMD1-205ENST00000455659 FLNCQ14315 2725 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 UBR5O95071 2799 aaPredicted RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TCRBV16S1A1N1A0A5B0 115 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 BLACEA4D250 179 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 SYNDIG1LA6NDD5 238 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 FAM227AF5H4B4 570 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 H3BQF6 201 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 K7EM74 188 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 MANBAO00462 879 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 CLDN4O14493 209 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TYROBPO43914 113 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TMPRSS11DO60235 418 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 KLHL41O60662 606 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TRIM13O60858 407 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PRKRAO75569 313 aaKnown RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 MYO1DO94832 1006 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 AIFM1O95831 613 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PDYNP01213 254 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 GBAP04062 536 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 SERPINA7P05543 415 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PRR35P0CG20 571 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 HSD3B1P14060 373 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 CREB1P16220 341 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 CPN2P22792 545 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PTX3P26022 381 aaPredicted RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 HSD3B2P26439 372 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PPP2R1BP30154 601 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ALDH3A1P30838 453 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ARFIP1P53367 373 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 HNRNPH2P55795 449 aaKnown RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 HSD17B7P56937 341 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 OR4D2P58180 307 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 BTG2P78543 158 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PLIN5Q00G26 463 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ID2Q02363 134 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 Q0VFX4 171 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 CSTF3Q12996 717 aaKnown RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 SLAMF1Q13291 335 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 CASP8Q14790 479 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 EXT1Q16394 746 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 IMPG1Q17R60 797 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 AGAP7PQ5VUJ5 663 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PLAG1Q6DJT9 500 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 OR4C11Q6IEV9 310 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 OR52E8Q6IFG1 317 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 RIPOR1Q6ZS17 1223 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ZCCHC23Q6ZST2 131 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PAGE2Q7Z2X7 111 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 COMMD6Q7Z4G1 85 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 CUZD1Q86UP6 607 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ZNF595Q8IYB9 648 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 SIRT6Q8N6T7 355 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 MYRIPQ8NFW9 859 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 METTL6Q8TCB7 284 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PKNOX2Q96KN3 472 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 AGAP4Q96P64 663 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 SMAD5Q99717 465 aaKnown RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 WDR77Q9BQA1 342 aaPredicted RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TRMOQ9BU70 441 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ACPTQ9BZG2 426 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 SHCBP1LQ9BZQ2 653 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 EPS8L2Q9H6S3 715 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 WDR41Q9HAD4 459 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 ADAP2Q9NPF8 381 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 NECTIN3Q9NQS3 549 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TEX10Q9NXF1 929 aaPredicted RBP6.63□□□□□ -1.35
COMMD1-205ENST00000455659 MS4A12Q9NXJ0 267 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PTGFRNQ9P2B2 879 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 FIS1Q9Y3D6 152 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
COMMD1-205ENST00000455659 TGFBR3LH3BV60 316 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 CYR61O00622 381 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 UBFD1O14562 309 aaKnown RBP6.62□□□□□ -1.35
COMMD1-205ENST00000455659 TM9SF1O15321 606 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 SLC28A2O43868 658 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 PCDH7O60245 1069 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 DPM1O60762 260 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 LDB3O75112 727 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 ULK1O75385 1050 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 ZWINTO95229 277 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 CHEK2O96017 543 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 IFNA16P05015 189 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 CHRNGP07510 517 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 FAM58BPP0C7Q3 252 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 ITGAMP11215 1152 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 NEFHP12036 1026 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 TLX1P31314 330 aaPredicted RBP6.62□□□□□ -1.35
COMMD1-205ENST00000455659 BSGP35613 385 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 ETV4P43268 484 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 SERPINB4P48594 390 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 MAPK12P53778 367 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 FOXA1P55317 472 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 SOX8P57073 446 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 SLC26A5P58743 744 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 TAS2R50P59544 299 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 HMGCS1Q01581 520 aa6.62□□□□□ -1.35
COMMD1-205ENST00000455659 ACTN3Q08043 901 aaPredicted RBP6.62□□□□□ -1.35
COMMD1-205ENST00000455659 C19orf57Q0VDD7 668 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms