RNA–Protein interactions for RNA: ENST00000455396.1

CRAT-205, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-205ENST00000455396 TNIP2Q8NFZ5 429 aa11.32□□□□□ -0.6
CRAT-205ENST00000455396 NEIL3Q8TAT5 605 aa11.32□□□□□ -0.6
CRAT-205ENST00000455396 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
CRAT-205ENST00000455396 MAGOHBQ96A72 148 aaKnown RBP11.32□□□□□ -0.6
CRAT-205ENST00000455396 Q96MF0 132 aa11.32□□□□□ -0.6
CRAT-205ENST00000455396 SECISBP2Q96T21 854 aaKnown RBP11.32□□□□□ -0.6
CRAT-205ENST00000455396 ZNF703Q9H7S9 590 aaPredicted RBP11.32□□□□□ -0.6
CRAT-205ENST00000455396 ADAP2Q9NPF8 381 aa11.32□□□□□ -0.6
CRAT-205ENST00000455396 TUBA8Q9NY65 449 aaPredicted RBP11.32□□□□□ -0.6
CRAT-205ENST00000455396 TRPS1Q9UHF7 1281 aa11.32□□□□□ -0.6
CRAT-205ENST00000455396 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.32□□□□□ -0.6
CRAT-205ENST00000455396 CCDC188H7C350 402 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 WWP2O00308 870 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 IL18BPO95998 194 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 IL2RAP01589 272 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 P04436 131 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 KCNJ1P48048 391 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 DNASE1L1P49184 302 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 HK2P52789 917 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CDK16Q00536 496 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 C2orf54Q08AI8 447 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 HYAL2Q12891 473 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 NAE1Q13564 534 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CUL1Q13616 776 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 ELAVL1Q15717 326 aaKnown RBP11.31□□□□□ -0.6
CRAT-205ENST00000455396 LRRC8EQ6NSJ5 796 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CASC4Q6P4E1 433 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CA13Q8N1Q1 262 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 LRRC25Q8N386 305 aaPredicted RBP11.31□□□□□ -0.6
CRAT-205ENST00000455396 TMEM132CQ8N3T6 1108 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 ISL2Q96A47 359 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 NTNG2Q96CW9 530 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CCDC68Q9H2F9 335 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 EXO5Q9H790 373 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 LIN28AQ9H9Z2 209 aaKnown RBP11.31□□□□□ -0.6
CRAT-205ENST00000455396 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
CRAT-205ENST00000455396 PNO1Q9NRX1 252 aaKnown RBP11.31□□□□□ -0.6
CRAT-205ENST00000455396 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
CRAT-205ENST00000455396 PDE10AQ9Y233 779 aa11.31□□□□□ -0.6
CRAT-205ENST00000455396 CTAGE15A4D2H0 777 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 GOLGA8KD6RF30 607 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 GOLGA8TH3BQL2 631 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 CLDN4O14493 209 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 C8GP07360 202 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 CTAGE8P0CG41 777 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 CCL3P10147 92 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 OPRM1P35372 400 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 SP140Q13342 867 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.6
CRAT-205ENST00000455396 NSUN5P2Q63ZY6 315 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 NEPROQ6NW34 567 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 TTC27Q6P3X3 843 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 ADGRD1Q6QNK2 874 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 PIWIL4Q7Z3Z4 852 aaKnown RBP11.3□□□□□ -0.6
CRAT-205ENST00000455396 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
CRAT-205ENST00000455396 CTAGE6Q86UF2 777 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 CTAGE4Q8IX94 777 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 KLHL7Q8IXQ5 586 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 MORN4Q8NDC4 146 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 TRPV3Q8NET8 790 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 OR5L2Q8NGL0 311 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 CD200R1Q8TD46 325 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 GRK7Q8WTQ7 553 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 DAZLQ92904 295 aaKnown RBP11.3□□□□□ -0.6
CRAT-205ENST00000455396 HSPBAP1Q96EW2 488 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 NPLQ9BXD5 320 aaPredicted RBP11.3□□□□□ -0.6
CRAT-205ENST00000455396 DDX47Q9H0S4 455 aaKnown RBP11.3□□□□□ -0.6
CRAT-205ENST00000455396 PARVBQ9HBI1 364 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 ZFP64Q9NPA5 681 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 SOX13Q9UN79 622 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 COMMD10Q9Y6G5 202 aa11.3□□□□□ -0.6
CRAT-205ENST00000455396 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 CD8B2A6NJW9 211 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 RNF212BA8MTL3 300 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 TGFBR3LH3BV60 316 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 SMAD7O15105 426 aaKnown RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 SERPINA6P08185 405 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 CTSSP25774 331 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 FNTAP49354 379 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 RAB8AP61006 207 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 CTBP1Q13363 440 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 PHKG1Q16816 387 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 MPEG1Q2M385 716 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 ZNF791Q3KP31 576 aaPredicted RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 ZNF549Q6P9A3 640 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 CCDC137Q6PK04 289 aaKnown RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 PHC2Q8IXK0 858 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 PM20D2Q8IYS1 436 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 OR56A3Q8NH54 315 aa11.29□□□□□ -0.6
CRAT-205ENST00000455396 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
CRAT-205ENST00000455396 PAQR8Q8TEZ7 354 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms