RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC22A16Q86VW1 577 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 TRAPPC5Q8IUR0 188 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 PYROXD2Q8N2H3 581 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 FAM109AQ8N4B1 249 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 KIF2BQ8N4N8 673 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 OR52E1Q8NGJ3 308 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 LMO3Q8TAP4 145 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 MRAPQ8TCY5 172 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF418Q8TF45 676 aaPredicted RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 SMAP2Q8WU79 429 aaPredicted RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 HOXB13Q92826 284 aaPredicted RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 C10orf90Q96M02 699 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 CINPQ9BW66 212 aaPredicted RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 VN1R1Q9GZP7 353 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 LANCL2Q9NS86 450 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 TMEM140Q9NV12 185 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 IRAK4Q9NWZ3 460 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 MOCS1Q9NZB8 636 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 KLHL42Q9P2K6 505 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 NFKBIL1Q9UBC1 381 aaPredicted RBP4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 TRPC4Q9UBN4 977 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 STAP1Q9ULZ2 295 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 KLHL20Q9Y2M5 609 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 MED12LQ86YW9 2145 aa4.75□□□□□ -1.65
SBDSP1-204ENST00000453858 A0A0J9YY10 115 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 OR2W5A6NFC9 320 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 MGAT4DA6NG13 374 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SCAMP2O15127 329 aaKnown RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC16A6O15403 523 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 HOXA3O43365 443 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 MT-CYBP00156 380 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 MMP8P22894 467 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 DPP4P27487 766 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 PTPN6P29350 595 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CASP1P29466 404 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 TLX1P31314 330 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 HTR7P34969 479 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 GRIA3P42263 894 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 RENBPP51606 427 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CCR8P51685 355 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 RAB39AQ14964 217 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CA9Q16790 459 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 TCTE1Q5JU00 501 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF569Q5MCW4 686 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 WASHC2DQ5SRD0 308 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CASC10Q5T4H9 136 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF474Q6S9Z5 364 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CLEC2AQ6UVW9 174 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF550Q7Z398 422 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ANKRD37Q7Z713 158 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SLC26A11Q86WA9 606 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 PQLC1Q8N2U9 271 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 PRR18Q8N4B5 295 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 TRAM1L1Q8N609 369 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 LILRA3Q8N6C8 439 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CCDC185Q8N715 623 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ZNF525Q8N782 197 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 C9orf106Q8NAJ2 232 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 C1orf131Q8NDD1 294 aaKnown RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 CENPIQ92674 756 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 C18orf8Q96DM3 657 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 HS6ST2Q96MM7 605 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 MGME1Q9BQP7 344 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 MED18Q9BUE0 208 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ZSCAN5AQ9BUG6 496 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SSBP3Q9BWW4 388 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SPATA16Q9BXB7 569 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 METTL17Q9H7H0 456 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 IL1RL2Q9HB29 575 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 C14orf105Q9NVL8 296 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SYBUQ9NX95 663 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 ICKQ9UPZ9 632 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 DRG1Q9Y295 367 aaKnown RBP4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 B3GALT5Q9Y2C3 310 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 SCINQ9Y6U3 715 aa4.74□□□□□ -1.65
SBDSP1-204ENST00000453858 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TRGV5A0A0B4J1U4 118 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 IGHV4-61A0A0C4DH41 118 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 PVALEFA0A1B0GWK0 134 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ATP6AP2A0A1C7CYW4 349 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 CCDC154A6NI56 674 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 B5MCH6 92 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 PJA2O43164 708 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 CTSVO60911 334 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 ATP6AP2O75787 350 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TNFSF13O75888 250 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 LETM1O95202 739 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 TUBB4AP04350 444 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 CHRM5P08912 532 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 KRT13P13646 458 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 MAGP20916 626 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 FBLP22087 321 aaKnown RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 PSMC2P35998 433 aaKnown RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 PRCPP42785 496 aa4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 UBA52P62987 128 aaKnown RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 IRX1P78414 480 aaPredicted RBP4.73□□□□□ -1.65
SBDSP1-204ENST00000453858 IL10RBQ08334 325 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms