RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MUS81Q96NY9 551 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 PRRX2Q99811 253 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 PITHD1Q9GZP4 211 aaPredicted RBP15.13■□□□□ 0.01
SNX17-204ENST00000453453 TUBB1Q9H4B7 451 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 IL1RL2Q9HB29 575 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 NECTIN3Q9NQS3 549 aa15.13■□□□□ 0.01
SNX17-204ENST00000453453 PCDH15Q96QU1 1955 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 CCDC154A6NI56 674 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 PATE3B3GLJ2 98 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 UPK1AO00322 258 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
SNX17-204ENST00000453453 PRICKLE3O43900 615 aaPredicted RBP15.12■□□□□ 0.01
SNX17-204ENST00000453453 PRAMEF4O60810 478 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 UGT2B11O75310 529 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 GABARAPO95166 117 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 CCDC159P0C7I6 412 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 PCNAP12004 261 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 POLR2CP19387 275 aaPredicted RBP15.12■□□□□ 0.01
SNX17-204ENST00000453453 OPRL1P41146 370 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 PPM1FP49593 454 aaPredicted RBP15.12■□□□□ 0.01
SNX17-204ENST00000453453 HTR6P50406 440 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
SNX17-204ENST00000453453 ABRAXAS2Q15018 415 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 RFX4Q33E94 735 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 XKR7Q5GH72 579 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 C6orf141Q5SZD1 244 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 DEPDC1Q5TB30 811 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 PRAMEF9Q5VWM5 478 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 ZCCHC8Q6NZY4 707 aaKnown RBP15.12■□□□□ 0.01
SNX17-204ENST00000453453 OR2L3Q8NG85 312 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 SAP25Q8TEE9 199 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 USP7Q93009 1102 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 UGT2B28Q9BY64 529 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 FSCN3Q9NQT6 498 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 TMEM184CQ9NVA4 438 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 SPHK1Q9NYA1 384 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 ACTR10Q9NZ32 417 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 SNX7Q9UNH6 387 aa15.12■□□□□ 0.01
SNX17-204ENST00000453453 ZNF318Q5VUA4 2279 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 ATP6AP2A0A1C7CYW4 349 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 OR5K3A6NET4 321 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 PPM1DO15297 605 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 ATP6AP2O75787 350 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 UBXN7O94888 489 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 CLIC3O95833 236 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 PDYNP01213 254 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 AMD1P17707 334 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 CD22P20273 847 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 PEBP1P30086 187 aaKnown RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 CSTF3Q12996 717 aaKnown RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 NR6A1Q15406 480 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 ATP6AP1LQ52LC2 224 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 ZC3H12BQ5HYM0 836 aaKnown RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 SCIMPQ6UWF3 145 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 SLC16A12Q6ZSM3 486 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 ZNF761Q86XN6 746 aaPredicted RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 LACC1Q8IV20 430 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 PHF10Q8WUB8 498 aaKnown RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 MTFMTQ96DP5 389 aaKnown RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 PPP3R2Q96LZ3 170 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 GTPBP2Q9BX10 602 aaKnown RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 RMND5AQ9H871 391 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 NTN4Q9HB63 628 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 CUEDC1Q9NWM3 386 aaPredicted RBP15.11■□□□□ 0.01
SNX17-204ENST00000453453 HRASLS2Q9NWW9 162 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 DNAJB9Q9UBS3 223 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 ADGRE2Q9UHX3 823 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 PTGDR2Q9Y5Y4 395 aa15.11■□□□□ 0.01
SNX17-204ENST00000453453 H7BY64 318 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 ZW10O43264 779 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 BCAS1O75363 584 aaPredicted RBP15.1■□□□□ 0.01
SNX17-204ENST00000453453 SLC22A3O75751 556 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 HSD3B1P14060 373 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 UGT2B7P16662 529 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 HSD3B2P26439 372 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 SERPINB1P30740 379 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 IDUAP35475 653 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 HPCAL1P37235 193 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 ZFP36L2P47974 494 aaKnown RBP15.1■□□□□ 0.01
SNX17-204ENST00000453453 POLR2JP52435 117 aaKnown RBP15.1■□□□□ 0.01
SNX17-204ENST00000453453 EPHA4P54764 986 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 ERVK-8P63133 956 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 REEP5Q00765 189 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 CHRNB3Q05901 458 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 CDC20Q12834 499 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 DDX39BQ13838 428 aaKnown RBP15.1■□□□□ 0.01
SNX17-204ENST00000453453 SLC5A12Q1EHB4 618 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 TMIGD1Q6UXZ0 262 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 PRSS48Q7RTY5 328 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 TRIM46Q7Z4K8 759 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 R3HCC1LQ7Z5L2 792 aaKnown RBP15.1■□□□□ 0.01
SNX17-204ENST00000453453 GATAD2AQ86YP4 633 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 LAS2Q8IYD9 372 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 CHDHQ8NE62 594 aaPredicted RBP15.1■□□□□ 0.01
SNX17-204ENST00000453453 OR7G3Q8NG95 312 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 OR6C4Q8NGE1 309 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 OR4C6Q8NH72 309 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 STARD8Q92502 1023 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 PRAP1Q96NZ9 151 aa15.1■□□□□ 0.01
SNX17-204ENST00000453453 CSF3RQ99062 836 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms