RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 LRRC8CQ8TDW0 803 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 SLC13A3Q8WWT9 602 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 PROX1Q92786 737 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 PIGTQ969N2 578 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 SNRNP40Q96DI7 357 aaKnown RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 OXNAD1Q96HP4 312 aaPredicted RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ZNF560Q96MR9 790 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 PANX3Q96QZ0 392 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 BTBD10Q9BSF8 475 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 NFKBIZQ9BYH8 718 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DCLK3Q9C098 648 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 POLR3FQ9H1D9 316 aaPredicted RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 HSD3B7Q9H2F3 369 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 NXF3Q9H4D5 531 aaKnown RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 RNPEPL1Q9HAU8 725 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 SERINC1Q9NRX5 453 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 SLCO1C1Q9NYB5 712 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ACTR3BQ9P1U1 418 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 TXNDC16Q9P2K2 825 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 WRAP73Q9P2S5 460 aaPredicted RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 LRWD1Q9UFC0 647 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 KCNS2Q9ULS6 477 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 ITM2BQ9Y287 266 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 STRAPQ9Y3F4 350 aaKnown RBP4.03□□□□□ -1.76
LINC00393-202ENST00000452852 JRKLQ9Y4A0 524 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 NME7Q9Y5B8 376 aa4.03□□□□□ -1.76
LINC00393-202ENST00000452852 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.77
LINC00393-202ENST00000452852 FRYLO94915 3013 aa4.03□□□□□ -1.77
LINC00393-202ENST00000452852 CKAP5Q14008 2032 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 CLUHO75153 1309 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 SF3B1O75533 1304 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 VWA8A3KMH1 1905 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 OR6C75A6NL08 312 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 TEX28O15482 410 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 SPRY3O43610 288 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ATP6AP2O75787 350 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 SLITRK3O94933 977 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 LETM1O95202 739 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 CLDN14O95500 239 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 PDGFBP01127 241 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ABHD2P08910 425 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 FAM200BP0CF97 657 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 HAPLN1P10915 354 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 MYOD1P15172 320 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ARF4P18085 180 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 CCNA2P20248 432 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 CBLP22681 906 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 GLRA2P23416 452 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 RPA1P27694 616 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ARL2P36404 184 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 NPBWR1P48145 328 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 AMTP48728 403 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 CAMLGP49069 296 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ATXN3P54252 364 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 BRWD1-AS2P59051 145 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ABATP80404 500 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ZXDBP98169 803 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 MAT1AQ00266 395 aaKnown RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 EGR4Q05215 589 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 MBTD1Q05BQ5 628 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 KLHL30Q0D2K2 578 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ELAVL2Q12926 359 aaKnown RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 OASLQ15646 514 aaKnown RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF585BQ52M93 769 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 PHLDA2Q53GA4 152 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 LIN9Q5TKA1 542 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 FUT10Q6P4F1 479 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 PRSS42Q7Z5A4 293 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 PGBD5Q8N414 524 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 IQCF1Q8N6M8 205 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 TMEM105Q8N8V8 129 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 AMER3Q8N944 861 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 FAM184AQ8NB25 1140 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ZBTB44Q8NCP5 570 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ANKRD20A12PQ8NF67 263 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 OR52E1Q8NGJ3 308 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 RNF128Q8TEB7 428 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 NEUROG1Q92886 237 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 FAM46BQ96A09 425 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 PHF21AQ96BD5 680 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 IFT74Q96LB3 600 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 C3orf30Q96M34 536 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 C16orf45Q96MC5 204 aaPredicted RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 FAM111AQ96PZ2 611 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 RTP3Q9BQQ7 232 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF559Q9BR84 538 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 SLC25A33Q9BSK2 321 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 RAB34Q9BZG1 259 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 SYTL2Q9HCH5 934 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 PNPLA3Q9NST1 481 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 MARCH5Q9NX47 278 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 SPASTQ9UBP0 616 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 ADAM28Q9UKQ2 775 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 AGO1Q9UL18 857 aaKnown RBP4.02□□□□□ -1.77
LINC00393-202ENST00000452852 DUSP12Q9UNI6 340 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 GPR132Q9UNW8 380 aa4.02□□□□□ -1.77
LINC00393-202ENST00000452852 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms