RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RAE1P78406 368 aaKnown RBP12.29□□□□□ -0.44
VPS33A-202ENST00000451053 KLC1Q07866 573 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 SLAMF1Q13291 335 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 MRM1Q6IN84 353 aaKnown RBP12.29□□□□□ -0.44
VPS33A-202ENST00000451053 OGFOD2Q6N063 350 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 LARP4Q71RC2 724 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS33A-202ENST00000451053 PAGE2Q7Z2X7 111 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 LAPTM4BQ86VI4 370 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 FAM47BQ8NA70 645 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 MIEF2Q96C03 454 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 LRRC37BQ96QE4 947 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 OR52B2Q96RD2 323 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 CCNL2Q96S94 520 aaPredicted RBP12.29□□□□□ -0.44
VPS33A-202ENST00000451053 CSF3RQ99062 836 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 TGIF2Q9GZN2 237 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 AKTIPQ9H8T0 292 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 LYRM4Q9HD34 91 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 LANCL2Q9NS86 450 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 C14orf105Q9NVL8 296 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 C1orf109Q9NX04 203 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 KCMF1Q9P0J7 381 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 KCND3Q9UK17 655 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 ADAM29Q9UKF5 820 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 NXT1Q9UKK6 140 aaKnown RBP12.29□□□□□ -0.44
VPS33A-202ENST00000451053 DAPP1Q9UN19 280 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 TMED5Q9Y3A6 229 aa12.29□□□□□ -0.44
VPS33A-202ENST00000451053 SEC16AO15027 2179 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 OR2W5A6NFC9 320 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 E9PBE3 544 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 EBAG9O00559 213 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 LSM1O15116 133 aaKnown RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 UBDO15205 165 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 KLHL41O60662 606 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 SEC22BO75396 215 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 CDC123O75794 336 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 MYO1DO94832 1006 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 FHP07954 510 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 FAM58BPP0C7Q3 252 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 PRR35P0CG20 571 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 ACPPP15309 386 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 FOLR3P41439 243 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 HNRNPFP52597 415 aaKnown RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 STX1BP61266 288 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 ERVK-8P63133 956 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 TLE3Q04726 772 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 IL10RAQ13651 578 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 GSTA3Q16772 222 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 GALNTL6Q49A17 601 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 SPIN4Q56A73 249 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 CCNYL2Q5T2Q4 361 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 CYP20A1Q6UW02 462 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 FAM9CQ8IZT9 166 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 EFCAB3Q8N7B9 438 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 TMEM52Q8NDY8 209 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 OR2Y1Q8NGV0 311 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 STARD8Q92502 1023 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 TBC1D20Q96BZ9 403 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 C11orf24Q96F05 449 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 SLC45A3Q96JT2 553 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 OR1F2PQ96R84 312 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 EFHD1Q9BUP0 239 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 EBPLQ9BY08 206 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 FAM117AQ9C073 453 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 LRTM1Q9HBL6 345 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 LYARQ9NX58 379 aaKnown RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 EIF3LQ9Y262 564 aaKnown RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 PADI2Q9Y2J8 665 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 ATG4BQ9Y4P1 393 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 POLR3HQ9Y535 204 aaPredicted RBP12.28□□□□□ -0.44
VPS33A-202ENST00000451053 ASB4Q9Y574 426 aa12.28□□□□□ -0.44
VPS33A-202ENST00000451053 NUP210LQ5VU65 1888 aa12.27□□□□□ -0.44
VPS33A-202ENST00000451053 A0A087WV48 116 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 ARHGAP10A1A4S6 786 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 IDSB3KWA1 339 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 PSMD12O00232 456 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 CYR61O00622 381 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 FCHO1O14526 889 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 SLC22A2O15244 555 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 PCDH7O60245 1069 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 B4GALT2O60909 372 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 PEX11AO75192 247 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 PRKRAO75569 313 aaKnown RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 CREG1O75629 220 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 CD63P08962 238 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 IDO1P14902 403 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 NCF2P19878 526 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 CPN2P22792 545 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 ADSLP30566 484 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 TIA1P31483 386 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 ATP4BP51164 291 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 MAPK12P53778 367 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 RPL38P63173 70 aaKnown RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 EMX2Q04743 252 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 KIAA0040Q15053 153 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms