RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 HLCSP50747 726 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 SERTAD2Q14140 314 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 ZRSR2Q15696 482 aaKnown RBP14.25□□□□□ -0.13
CHD3-205ENST00000449744 KRTCAP3Q53RY4 240 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 DEPDC1Q5TB30 811 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 KHDRBS2Q5VWX1 349 aaKnown RBP14.25□□□□□ -0.13
CHD3-205ENST00000449744 LIPJQ5W064 366 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 ZNF793Q6ZN11 406 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 UBE3DQ7Z6J8 389 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 C7orf57Q8NEG2 295 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 SLC44A1Q8WWI5 657 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 DAZLQ92904 295 aaKnown RBP14.25□□□□□ -0.13
CHD3-205ENST00000449744 RELTQ969Z4 430 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 REPS1Q96D71 796 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 MAPKAP1Q9BPZ7 522 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 FUT8Q9BYC5 575 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 ALOXE3Q9BYJ1 711 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 OR51B5Q9H339 312 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 PCDHGA11Q9Y5H2 935 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 CLDN16Q9Y5I7 305 aa14.25□□□□□ -0.13
CHD3-205ENST00000449744 MYOCOSA0A1B0GUC4 107 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 NPIPA5E9PKD4 350 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 KLK8O60259 260 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 NME2P1O60361 137 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 ITGA10O75578 1167 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 RBP1P09455 135 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 NME2P22392 152 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 ARL1P40616 181 aaPredicted RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 PIK3CBP42338 1070 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 GTF2H2Q13888 395 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 PCBP2Q15366 365 aaKnown RBP eCLIP14.24□□□□□ -0.131e-8■■■■■ 32.3
CHD3-205ENST00000449744 UBAP2Q5T6F2 1119 aaKnown RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 OR4C11Q6IEV9 310 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 GTF2H2CQ6P1K8 395 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 ARMC10Q8N2F6 343 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 OR14A16Q8NHC5 309 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 HUS1BQ8NHY5 278 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 RGMAQ96B86 450 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 MAGED4Q96JG8 741 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 SCYL1Q96KG9 808 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 GPR137Q96N19 417 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 FRMD6Q96NE9 622 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 PAFAH2Q99487 392 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 TSPAN10Q9H1Z9 355 aaPredicted RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 TRIM45Q9H8W5 580 aaPredicted RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 IPPKQ9H8X2 491 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 KCMF1Q9P0J7 381 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 VTI1BQ9UEU0 232 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 SH3BGRL2Q9UJC5 107 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 NPIPA1Q9UND3 350 aa14.24□□□□□ -0.13
CHD3-205ENST00000449744 PPIEQ9UNP9 301 aaKnown RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 KLF13Q9Y2Y9 288 aaPredicted RBP14.24□□□□□ -0.13
CHD3-205ENST00000449744 POC1B-GALNT4F8VUJ3 575 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 CCL21O00585 134 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 UGDHO60701 494 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 SLC19A2O60779 497 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 LDB3O75112 727 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 KRT38O76015 456 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 ZNF24P17028 368 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 SSR4P51571 173 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 GPR143P51810 404 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 SLAMF1Q13291 335 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 TECRLQ5HYJ1 363 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 MTFR2Q6P444 385 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 GOLGA7Q7Z5G4 137 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 CYP4Z2PQ8N1L4 340 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 PLD6Q8N2A8 252 aaKnown RBP14.23□□□□□ -0.13
CHD3-205ENST00000449744 RNF175Q8N4F7 328 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 MORN4Q8NDC4 146 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 UHMK1Q8TAS1 419 aaKnown RBP14.23□□□□□ -0.13
CHD3-205ENST00000449744 ATP6V1E2Q96A05 226 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 GPR78Q96P69 363 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 MTERF1Q99551 399 aaKnown RBP14.23□□□□□ -0.13
CHD3-205ENST00000449744 DMRT3Q9NQL9 472 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 MS4A12Q9NXJ0 267 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 ZNF223Q9UK11 482 aaPredicted RBP14.23□□□□□ -0.13
CHD3-205ENST00000449744 TMCO1Q9UM00 188 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 YARS2Q9Y2Z4 477 aaKnown RBP14.23□□□□□ -0.13
CHD3-205ENST00000449744 DOPEY1Q5JWR5 2465 aa14.23□□□□□ -0.13
CHD3-205ENST00000449744 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 LRRC14BA6NHZ5 514 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 C17orf105B2RV13 164 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 H0YIV9 168 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 KLRC4-KLRK1H3BQV0 150 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 SMIM24O75264 130 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 SCELO95171 688 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 SIX3O95343 332 aaPredicted RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 ESRRAP11474 423 aaPredicted RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 COX7A2P14406 83 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 PTX3P26022 381 aaPredicted RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 CNTFP26441 200 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 TLX1P31314 330 aaPredicted RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 CA7P43166 264 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 RPS13P62277 151 aaKnown RBP14.22□□□□□ -0.13
CHD3-205ENST00000449744 ID2Q02363 134 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 CPSF6Q16630 551 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD3-205ENST00000449744 TSNAXIP1Q2TAA8 658 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 ZNF787Q6DD87 383 aa14.22□□□□□ -0.13
CHD3-205ENST00000449744 METTL2BQ6P1Q9 378 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms