RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SEC22CQ9BRL7 303 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 SORBS1Q9BX66 1292 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 CRTAC1Q9NQ79 661 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 CPA4Q9UI42 421 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 KLF2Q9Y5W3 355 aaPredicted RBP9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 ANKRD31Q8N7Z5 1873 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 SMIM28A0A1B0GU29 152 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 C7orf66A4D0T2 115 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 ZAR1LA6NP61 321 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 IQCF5A8MTL0 148 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 LOC730098B7Z3J9 87 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 TLR4O00206 839 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 KPNA5O15131 536 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 GLUD1P00367 558 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 PRPS2P11908 318 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 CHRNA5P30532 468 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 FEN1P39748 380 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 CPSF6Q16630 551 aaKnown RBP eCLIP9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 AFTPHQ6ULP2 937 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 OVCH2Q7RTZ1 564 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 FTMTQ8N4E7 242 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 AQP11Q8NBQ7 271 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 CLRN3Q8NCR9 226 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 HASPINQ8TF76 798 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 WBP1Q96G27 269 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 RADILQ96JH8 1075 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 MED18Q9BUE0 208 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 ERAP1Q9NZ08 941 aa9.02□□□□□ -0.97
SYNPO2-204ENST00000448416 MYBPHLA2RUH7 354 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SYN3O14994 580 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SMPD1P17405 629 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 HOXC13P31276 330 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 RAB41Q5JT25 222 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 BHLHA9Q7RTU4 235 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 PM20D2Q8IYS1 436 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 FAM9CQ8IZT9 166 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 OR4A15Q8NGL6 344 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 OR4C15Q8NGM1 316 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 OR2T4Q8NH00 348 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 HGDQ93099 445 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SCRN2Q96FV2 425 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 PCED1BQ96HM7 432 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SECISBP2Q96T21 854 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ZNF408Q9H9D4 720 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 CD93Q9NPY3 652 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SLC39A1Q9NY26 324 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 WWOXQ9NZC7 414 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 PFDN2Q9UHV9 154 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 RPL36Q9Y3U8 105 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 TEX13CA0A0J9YWL9 993 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 A0A1B0GVI7 797 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SGTAO43765 313 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SH3BP5O60239 455 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 NBNO60934 754 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 IFNA14P01570 189 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 PTBP1P26599 531 aaKnown RBP eCLIP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 BDKRB1P46663 353 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 HOXA1P49639 335 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 CRYBA2P53672 197 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 RPS25P62851 125 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SELENOWP63302 87 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 PLA1AQ53H76 456 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ATAT1Q5SQI0 421 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 MANEALQ5VSG8 457 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 AFMIDQ63HM1 303 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 MZT2AQ6P582 158 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SLC27A1Q6PCB7 646 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 CHST13Q8NET6 341 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 MYO19Q96H55 970 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 APOL5Q9BWW9 433 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ZNF624Q9P2J8 865 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 FZD4Q9ULV1 537 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 IRAK2O43187 625 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 LRRTM2O43300 516 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ZNF91Q05481 1191 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 RBBP4Q09028 425 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ETFDHQ16134 617 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 IFI44LQ53G44 452 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 KRT74Q7RTS7 529 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 SYNPOQ8N3V7 929 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 STPG2Q8N412 459 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 TOP6BLQ8N6T0 577 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 OR2T35Q8NGX2 323 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 CDC26Q8NHZ8 85 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 USP7Q93009 1102 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 FAM193BQ96PV7 902 aaPredicted RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 OR2M2Q96R28 347 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 COPS8Q99627 209 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 TSSK6Q9BXA6 273 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 ACPTQ9BZG2 426 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 TPT1P8Q9HAU6 139 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 TLR8Q9NR97 1041 aaKnown RBP9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 KCTD5Q9NXV2 234 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 COPZ2Q9P299 210 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 FTSJ1Q9UET6 329 aa9.01□□□□□ -0.97
SYNPO2-204ENST00000448416 GBF1Q92538 1859 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms