RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 DGKEP52429 567 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 CRYBA2P53672 197 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SELENOWP63302 87 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 PPP2R2BQ00005 443 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 HYAL2Q12891 473 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TDGQ13569 410 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZIC1Q15915 447 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 KIAA0895LQ68EN5 471 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 CEACAM20Q6UY09 585 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 DGLUCYQ7Z3D6 616 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 NRROSQ86YC3 692 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SFTPA2Q8IWL1 248 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC22A18ASQ8N1D0 253 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ARL10Q8N8L6 244 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ACOT4Q8N9L9 421 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SMYD1Q8NB12 490 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZBED6CLQ96FA7 236 aaPredicted RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 KCNC2Q96PR1 638 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 DOHHQ9BU89 302 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ING2Q9H160 280 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SYNPO2LQ9H987 977 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 LMAN1LQ9HAT1 526 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 TM9SF3Q9HD45 589 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 DNAAF2Q9NVR5 837 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 FAM118AQ9NWS6 357 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 USP36Q9P275 1121 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 ADAM29Q9UKF5 820 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 WBP11Q9Y2W2 641 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 SAMHD1Q9Y3Z3 626 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 HS3ST3A1Q9Y663 406 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 AP1M2Q9Y6Q5 423 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 COMMD3-BMI1R4GMX3 469 aa9.05□□□□□ -0.96
COL6A4P1-201ENST00000446690 C4orf51C9J302 202 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 HPRP00739 348 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 VIPP01282 170 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CELA2BP08218 269 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PABPC4LP0CB38 370 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 DDX5P17844 614 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 HIST1H1TP22492 207 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ELK4P28324 431 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PXNP49023 591 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CDK9P50750 372 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PRKAG1P54619 331 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 DSTNP60981 165 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 BTN3A2P78410 334 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 KCNJ10P78508 379 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 FADDQ13158 208 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 C1orf61Q13536 156 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 TP53BP2Q13625 1128 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 APOFQ13790 326 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 GPR18Q14330 331 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ABHD17CQ6PCB6 329 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 SHQ1Q6PI26 577 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 RBM44Q6ZP01 1051 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CEP68Q76N32 757 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 KCT2Q8NC54 265 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 RAB8BQ92930 207 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 FAIM2Q9BWQ8 316 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 RAD21L1Q9H4I0 556 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 REEP1Q9H902 201 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PRDM7Q9NQW5 492 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 TRNAU1APQ9NX07 287 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PDP1Q9P0J1 537 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 RAB23Q9ULC3 237 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ATG4BQ9Y4P1 393 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PCDHGA4Q9Y5G9 962 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 GMEB1Q9Y692 573 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 A0A0J9YVX5 310 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PGRMC2O15173 223 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 MITFO75030 526 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 SEMG1P04279 462 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 THEGLP0DJG4 465 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 C8orf89P0DMQ9 161 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ALPPL2P10696 532 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CHRNB1P11230 501 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CTSEP14091 401 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ETS2P15036 469 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 POU3F3P20264 500 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 MAGP20916 626 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CERS1P27544 350 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 DNAJA1P31689 397 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 AHRP35869 848 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 POLR2IP36954 125 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PIGAP37287 484 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 CCT3P49368 545 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 NCBP2P52298 156 aaKnown RBP eCLIP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 NR1H2P55055 460 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 PCBP4P57723 403 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 RBBP4Q09028 425 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 KCNAB2Q13303 367 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF750Q32MQ0 723 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 C18orf63Q68DL7 685 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 C6orf120Q7Z4R8 191 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF761Q86XN6 746 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 DCP2Q8IU60 420 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 HORMAD2Q8N7B1 307 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 MFSD9Q8NBP5 474 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 TSTD1Q8NFU3 115 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms