RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TM9SF4Q92544 642 aa16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 PGM2Q96G03 612 aa16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 IMMP1LQ96LU5 166 aa16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 ZNF552Q9H707 407 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 DDX31Q9H8H2 851 aaKnown RBP16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 RRAGDQ9NQL2 400 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 NECTIN3Q9NQS3 549 aa16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 MS4A12Q9NXJ0 267 aa16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 KCMF1Q9P0J7 381 aa16.39■□□□□ 0.21
SMARCAL1-209ENST00000444508 IGKV3D-11A0A0A0MRZ8 115 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TCRBV16S1A1N1A0A5B0 115 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 ARHGAP10A1A4S6 786 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 GOLGA6L10A6NI86 522 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TYROBPO43914 113 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 DPM1O60762 260 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 EEDO75530 441 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 HSD3B1P14060 373 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 HSD3B2P26439 372 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 ALDH3A1P30838 453 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 HNRNPFP52597 415 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 ZNF33BQ06732 778 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 KLRB1Q12918 225 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 CSTF3Q12996 717 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 BTBD16Q32M84 506 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TCHHL1Q5QJ38 904 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 JMJD6Q6NYC1 403 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 GPR180Q86V85 440 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 EXOC3L1Q86VI1 746 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TEX19Q8NA77 164 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TMEM52Q8NDY8 209 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 ZBTB9Q96C00 473 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 WDR77Q9BQA1 342 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TRMOQ9BU70 441 aa16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 ZNF717Q9BY31 904 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 MRPL1Q9BYD6 325 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 SSU72Q9NP77 194 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 TNRC6AQ8NDV7 1962 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-209ENST00000444508 DOCK10Q96BY6 2186 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 A0A0A6YYD5 115 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 B8ZZF3 427 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 UBFD1O14562 309 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 CTNSO60931 367 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 FAM58BPP0C7Q3 252 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 BUD31P41223 144 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 STX4Q12846 297 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 PLAG1Q6DJT9 500 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 CLNKQ7Z7G1 428 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 GBP7Q8N8V2 638 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 C7orf57Q8NEG2 295 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 BRIX1Q8TDN6 353 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 CNDP1Q96KN2 507 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 KCNA7Q96RP8 456 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 HBEGFQ99075 208 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 GATA5Q9BWX5 397 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 VPS29Q9UBQ0 182 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 ADAM29Q9UKF5 820 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 TIMM22Q9Y584 194 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 ACTL7BQ9Y614 415 aa16.37■□□□□ 0.21
SMARCAL1-209ENST00000444508 ZNF462Q96JM2 2506 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 KLK1P06870 262 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 CELA2AP08217 269 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 TNFRSF17Q02223 184 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 CRB2Q5IJ48 1285 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 CCNYL2Q5T2Q4 361 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 ISLR2Q6UXK2 745 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 METTL4Q8N3J2 472 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 M1APQ8TC57 530 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 MECRQ9BV79 373 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 SHCBP1LQ9BZQ2 653 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 EPS8L2Q9H6S3 715 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 RPF2Q9H7B2 306 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 WDR41Q9HAD4 459 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 PNO1Q9NRX1 252 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 PTGFRNQ9P2B2 879 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 ANAPC2Q9UJX6 822 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 ATG4BQ9Y4P1 393 aa16.36■□□□□ 0.21
SMARCAL1-209ENST00000444508 SAGE2PA6NJ88 616 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 A8MUA0 341 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 TM9SF1O15321 606 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 PROM1O43490 865 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 TMPRSS11DO60235 418 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 NPHS1O60500 1241 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 GBAP04062 536 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 IFNA16P05015 189 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 NR2F6P10588 404 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 ITGAMP11215 1152 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 PPP2R1BP30154 601 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 HTR6P50406 440 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 HNRNPH2P55795 449 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 SLC26A5P58743 744 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 SERTAD2Q14140 314 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 CASP8Q14790 479 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 TNFAIP8L3Q5GJ75 292 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 FAM219BQ5XKK7 198 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 MRM1Q6IN84 353 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 PRICKLE2Q7Z3G6 844 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 COMMD6Q7Z4G1 85 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 ZADH2Q8N4Q0 377 aa16.35■□□□□ 0.21
SMARCAL1-209ENST00000444508 SIRT6Q8N6T7 355 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms