RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 MST1P26927 711 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 EEF1DP29692 281 aaKnown RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 TRHRP34981 398 aaPredicted RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 SSR2P43308 183 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 ARFIP1P53367 373 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 OC90Q02509 493 aaPredicted RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 DDX39BQ13838 428 aaKnown RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 ELAVL1Q15717 326 aaKnown RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 C4orf17Q53FE4 359 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 OR4C11Q6IEV9 310 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 TRMT10CQ7L0Y3 403 aaKnown RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 TMEM178AQ8NBL3 297 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 WDR20Q8TBZ3 569 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 RGMAQ96B86 450 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 REPS1Q96D71 796 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 PHF21BQ96EK2 531 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 VMP1Q96GC9 406 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 HES7Q9BYE0 225 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 PRM3Q9NNZ6 103 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 KLHL1Q9NR64 748 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 VTI1BQ9UEU0 232 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 ZNF223Q9UK11 482 aaPredicted RBP12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 OSGIN2Q9Y236 505 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 SPACA6W5XKT8 324 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 UNC79Q9P2D8 2635 aa12.75□□□□□ -0.37
AP001062.3-202ENST00000444409 ZGRF1Q86YA3 2104 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 ASPDHA6ND91 283 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PLPP1O14494 284 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 FCHO1O14526 889 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 OR7A17O14581 309 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 RIPK2O43353 540 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SLC25A12O75746 678 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 CLDN9O95484 217 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SP1P08047 785 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 RHOXF2BP0C7M4 288 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PTX3P26022 381 aaPredicted RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 GCAP28676 217 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 CYB561P49447 251 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 RAP1GDS1P52306 607 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 RPS13P62277 151 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PHEXP78562 749 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PMP22Q01453 160 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 STX4Q12846 297 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 CUL3Q13618 768 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SERTAD2Q14140 314 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 CPSF6Q16630 551 aaKnown RBP eCLIP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 LGSNQ5TDP6 509 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SLC25A25Q6KCM7 469 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 ZNF227Q86WZ6 799 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 TMEM132CQ8N3T6 1108 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 ZCCHC7Q8N3Z6 543 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 OR52B6Q8NGF0 335 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PTPMT1Q8WUK0 201 aaPredicted RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 DAZLQ92904 295 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 NCLNQ969V3 563 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SCYL1Q96KG9 808 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 MRPL57Q9BQC6 102 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 RHOXF2Q9BQY4 288 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 SORBS1Q9BX66 1292 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 ZNF717Q9BY31 904 aaPredicted RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 ALOXE3Q9BYJ1 711 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 TXLNGYQ9BZA5 131 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 NOL11Q9H8H0 719 aaKnown RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 MS4A12Q9NXJ0 267 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PSD3Q9NYI0 1048 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PCTPQ9UKL6 214 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 FBXW2Q9UKT8 454 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 PPT2Q9UMR5 302 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 RNF11Q9Y3C5 154 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 CLCA3PQ9Y6N3 262 aa12.74□□□□□ -0.37
AP001062.3-202ENST00000444409 FOXE1O00358 373 aaPredicted RBP12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 LRRTM2O43300 516 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 NME2P1O60361 137 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 LDB3O75112 727 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 SMIM24O75264 130 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 IFNA16P05015 189 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 SBK3P0C264 359 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 FAM153BP0C7A2 387 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 NME2P22392 152 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 CPN2P22792 545 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 HLCSP50747 726 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 KCNK10P57789 538 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 IGLV3-21P80748 117 aaPredicted RBP12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 SRSF11Q05519 484 aaKnown RBP12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 TRAF3Q13114 568 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 ZRSR2Q15696 482 aaKnown RBP12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 FAM153CQ494X1 144 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 TIFABQ6ZNK6 161 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 GALNTL5Q7Z4T8 443 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 TMEM151AQ8N4L1 468 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 MORN4Q8NDC4 146 aa12.73□□□□□ -0.37
AP001062.3-202ENST00000444409 C7orf57Q8NEG2 295 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms