RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 QRFPRQ96P65 431 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 NDNQ99608 321 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 C20orf96Q9NUD7 363 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-208ENST00000443046 ALKBH4Q9NXW9 302 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 TAS2R13Q9NYV9 303 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF629Q9UEG4 869 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-208ENST00000443046 VTI1BQ9UEU0 232 aa13.29□□□□□ -0.28
HMGN1-208ENST00000443046 CLDN4O14493 209 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 DVL2O14641 736 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 GOSR1O95249 250 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 EPPINO95925 133 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 RFPL3SP0C7P2 107 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 CD53P19397 219 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 BMP5P22003 454 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 TACR1P25103 407 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 CDKN2DP55273 166 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 RNF4P78317 190 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 CCZ1BP86790 482 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 CCZ1P86791 482 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 SLC13A2Q13183 592 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 OPN5Q6U736 354 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 LRRC25Q8N386 305 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 C2CD4AQ8NCU7 369 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 MCUQ8NE86 351 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 TNIP2Q8NFZ5 429 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 SPATA3Q8NHX4 192 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 DAZLQ92904 295 aaKnown RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 GAL3ST3Q96A11 431 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 MS4A6EQ96DS6 147 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 AIF1LQ9BQI0 150 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 ZNF703Q9H7S9 590 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 NEUROD4Q9HD90 331 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 ACKR4Q9NPB9 350 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 TRMT1Q9NXH9 659 aaKnown RBP13.28□□□□□ -0.28
HMGN1-208ENST00000443046 CLCA3PQ9Y6N3 262 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 NINQ8N4C6 2090 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 ARID1AO14497 2285 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 HIVEP2P31629 2446 aa13.28□□□□□ -0.28
HMGN1-208ENST00000443046 KIAA1549Q9HCM3 1950 aa13.27□□□□□ -0.28
HMGN1-208ENST00000443046 LRIT2A6NDA9 550 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 FAM171A2A8MVW0 826 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 KDM4EB2RXH2 506 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 CTNSO60931 367 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 LY6G6DO95868 133 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 TBX6O95947 436 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 P04436 131 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 HNRNPH1P31943 449 aaKnown RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 TIMP3P35625 211 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 STXBP1P61764 594 aaKnown RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 DCAF7P61962 342 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 RBBP5Q15291 538 aaKnown RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 MPEG1Q2M385 716 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 ZNF791Q3KP31 576 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 HSP90AA5PQ58FG0 334 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 PIGGQ5H8A4 983 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 SHEQ5VZ18 495 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 CXorf67Q86X51 503 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 OR14A16Q8NHC5 309 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 LRRC46Q96FV0 321 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 FAR2Q96K12 515 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 COX4I2Q96KJ9 171 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 SIGLEC10Q96LC7 697 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 SERPINB12Q96P63 405 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 FAM167BQ9BTA0 163 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 PROK2Q9HC23 129 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 XAB2Q9HCS7 855 aaKnown RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 QPCTLQ9NXS2 382 aa13.27□□□□□ -0.29
HMGN1-208ENST00000443046 MTRF1LQ9UGC7 380 aaKnown RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.27□□□□□ -0.29
HMGN1-208ENST00000443046 A0A1W2PPR1 153 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 TUBAL3A6NHL2 446 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 LRRC3CA6NJW4 275 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 AHRRA9YTQ3 701 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 ENO2P09104 434 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 PIGAP37287 484 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 TERF1P54274 439 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 IL2P60568 153 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 NKX6-1P78426 367 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 GPS1Q13098 491 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 TRIP13Q15645 432 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 PPP1R3AQ16821 1122 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 ADPRMQ3LIE5 342 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 ACSF3Q4G176 576 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 RBM20Q5T481 1227 aaKnown RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 SBSNQ6UWP8 590 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 CLNKQ7Z7G1 428 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 THOC6Q86W42 341 aaKnown RBP13.26□□□□□ -0.29
HMGN1-208ENST00000443046 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 GPATCH11Q8N954 259 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 FAM47BQ8NA70 645 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 OR5L2Q8NGL0 311 aa13.26□□□□□ -0.29
HMGN1-208ENST00000443046 NEIL3Q8TAT5 605 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms